Sinorhizobium meliloti 2011: SM2011_a0680
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Entry
SM2011_a0680 CDS
T02497
Name
(GenBank) decarboxylase (lysine,ornithine,arginine)
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
smel
Sinorhizobium meliloti 2011
Pathway
smel00330
Arginine and proline metabolism
smel00480
Glutathione metabolism
smel01100
Metabolic pathways
smel01110
Biosynthesis of secondary metabolites
smel04148
Efferocytosis
Module
smel_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
smel00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SM2011_a0680
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SM2011_a0680
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SM2011_a0680
Enzymes [BR:
smel01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SM2011_a0680
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AGG70048
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All DBs
Position
pSymA:complement(363714..366077)
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AA seq
787 aa
AA seq
DB search
MIPRDVKAPTVPIPFHKLLKVVAFVDESNLETKRLLAHIVAENFEVELRGSYNADVSEDA
SVGAYIGTVEGGRLEDARKFVRAVRDIGFRTPLWALADSHGIADIAAIKMAGEVDGFVYL
GQQTPAFYAKQIISSLVNYGKTLLPPFFGGLMAYDGEANIAFDCPGHQGGQFYRKSPAGQ
LFFNYFGESIFRADLCNADVDLGDLLIHEGPAAEAQKNAARIFGADRTYFILNGTSTSNK
VVTNAVLRAGDLVLFDRNNHKSLHQGALVQAGAIPVYLPTSRNSFGMIGAVDWDAWDEAS
LRRQIERHPLVEDKARASAERPFRLACIQLATYDGTIYNVRKVLEQIGHLCDYVLWDEAW
IGYNAFHPLFEDHSPMRIDTLDAEMPGLFSTQSVHKQGAGFSQASQIHKRDEHIRDQRRY
VEHKRFNESLLMHVSTSPFYPLFASLDVNAKIHEGKAGEMLWDRCIELGIEARKKLREFT
RYYESSGAGPQEQWFFDPFVPDVVTISGSKHTEDVVESRWEALPTEVIKREQQCWRFRPG
ASWHGYSGYSDGYAMVDPNKLTLLTPGIDRATGEYRDFGIPATMVANYLREQRIVPEKCD
LNSILFLLTPAEDESKLNTLIAKLVKFKNLWDRDAPLAEVLPTVFAANRERYAGYTLRQV
CAEMHDFYRQAGVKELQRLCFRAESMPEPAMTPKAAYEALVANEVDYVALDEAFGRISAT
LALIYPPGIGVIVPGERWDERARPMHNYFLAFQESFNRFPGFNYEVQGVFQERVDGQIKF
YTYAVRE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgataccgcgtgatgtgaaggctccgaccgtccccattccattccacaagctgctcaag
gtcgtggcattcgtcgacgaaagcaatctggaaacgaagagacttcttgcgcacattgtc
gcggaaaatttcgaagtcgagttgcgcggcagctataacgccgacgtgtccgaggacgct
tcggttggtgcctatattgggacggtcgagggcggacggctcgaagatgcccgcaagttc
gtccgtgcggtcagagacatcggattccgcacgccgctatgggccctcgcagactcccac
ggcattgcggacattgcggcgattaaaatggccggtgaagtggacggcttcgtttatctt
gggcagcagacaccggcgttctacgcaaagcagatcatttcaagtctggtcaattacggc
aagacgctcctcccgccgtttttcggcggcctcatggcttacgatggagaagccaacatc
gcgttcgactgtccaggacaccaaggcggacagttttaccggaagtcgcccgcaggccag
ctctttttcaattatttcggcgaaagcatatttcgcgccgatctttgcaatgccgacgtc
gaccttggcgacctgctaatccatgaagggccggcggccgaggcgcagaagaatgcggca
aggattttcggcgcggaccggacctacttcattctgaacggcacaagcacatcgaacaaa
gtggttacgaacgcggtactgcgcgcaggcgacctcgtgttgttcgaccgcaacaatcac
aaatcgcttcatcagggcgcgctggtgcaggcgggagcgataccagtttacctgccgacc
tcacgcaactcgttcgggatgatcggtgccgtggactgggacgcctgggacgaagcgagc
ctgcgccggcagatcgaaaggcatcccctggtcgaggacaaggcgcgagccagtgcagag
cgaccgttccgactcgcctgcatccaacttgcgacctatgacggcactatttacaacgtc
cgcaaggtgttggaacagatcggacacctgtgcgactacgtactctgggacgaggcgtgg
atcggctacaacgctttccacccgttgtttgaagaccacagtccgatgcggatcgacacg
cttgatgccgaaatgccggggttgttctcaacgcaatccgtccacaagcaaggggcgggc
ttttcgcaagcctcgcagattcacaagcgcgacgagcacatccgtgatcagcgccgctac
gtcgaacataagcgcttcaacgagtcgcttctcatgcatgtttcgacttcaccattctac
ccgctattcgcctcgttggacgtcaatgccaagatccacgagggcaaggctggtgaaatg
ctctgggatcgctgtatcgagctgggtatcgaggcacgcaagaagctcagagaattcacc
cggtactacgagtcgtcgggtgcggggccccaggagcagtggttcttcgaccccttcgta
cccgatgtggtcacgatctcgggctccaaacataccgaggatgttgtcgagtcccgttgg
gaggcgctcccgacggaggtcatcaaacgggaacagcagtgctggcgcttccgtccaggg
gcttcatggcatggatattccggctactccgatggctacgcaatggtggatccaaacaag
cttacgcttctcactccaggcatagaccgtgcgaccggggagtatcgagacttcggcatc
ccagcaacgatggttgccaattatcttcgcgaacagcgcatcgttcccgagaagtgcgac
ctcaacagcatactgtttctgctcacacctgccgaggacgagagcaagctcaacacgctg
atagccaagttggtgaagttcaagaacttatgggatcgggacgcacctttggccgaggtt
ctaccaaccgtgtttgcggcgaacagagagcgctatgcaggatacacactccggcaggtc
tgcgcagagatgcacgacttctatcggcaagcaggggtcaaggaattgcagcgcctctgc
ttcagggcggagagcatgcccgagcccgcaatgacgccgaaagcggcttatgaagccctc
gtggcaaacgaagttgattatgtggcactcgacgaggctttcggcaggatttcggccacg
ctcgcgttgatctacccgccgggcataggcgtcatagtccccggggagcgctgggacgaa
agggcgcggccgatgcacaactatttcctggcattccaagagtccttcaaccgcttcccc
ggcttcaattacgaggtccagggtgtgtttcaggagcgcgttgacggccagatcaaattc
tacacctacgccgtgcgcgagtaa
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