Sinorhizobium meliloti 2011: SM2011_b20990
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Entry
SM2011_b20990 CDS
T02497
Symbol
nfeD
Name
(GenBank) putative membrane protein necessary for nodulation competitiveness
KO
K07403
membrane-bound serine protease (ClpP class)
Organism
smel
Sinorhizobium meliloti 2011
Brite
KEGG Orthology (KO) [BR:
smel00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99975 Protein processing
SM2011_b20990 (nfeD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
NfeD_membrane
NfeD1b_N
NfeD
Motif
Other DBs
NCBI-ProteinID:
AGG72123
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All DBs
Position
pSymB:complement(1223689..1225071)
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AA seq
460 aa
AA seq
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MARILILLFSLLSAFAFPVTPVPGAERTALVLHVNGAISPAAAEYVTRGLQQARDRGAAL
VVLQMDTPGGLDTSMRDIIRAILDSPVPVASFVSPSGARAASAGTYILYASHIAAMAPGT
NLGAATPIAIGGGLFGNDEQEGEEKPGDPDKPEPRKPANAGEAKLINDAVAYIRGLAELR
NRNVDWAERAVREAASLSSAAAAREQVIDFTAVSVDDLLKQAHGRAVRIGQSDVRLDTSG
LAIEDLPPDWRTRLLSVITNPNVALLLMMVGIYGLIFEFLAPGTVVPGTIGGISLLLGLY
ALAVLPVSYAGVGLILLGAGLLVAEAHAPSFGVLGLGGTVALVLGAAILFDTDMPGLQVS
WPALSGIAIASLAFSLLVARLALVSRRHKVATGAEEMIGISGKVDSWAGADGYVIAHGER
WRAVSSESLGPGEDVMVVGREGLTLKVARNAAPGGDGDRS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcctcatcctgttgttcagtctcctgtcggccttcgcatttcctgtcacg
ccggtgcccggagccgagcgcacggcgctcgtcctgcacgtcaacggcgccataagcccc
gccgcggcagaatatgtgacgcgcggccttcagcaagccagggatcgcggcgccgcgctg
gtggtcctgcagatggacacgcccggcggactggatacgtcgatgcgcgacatcatacgc
gccatcctcgattctcccgtgccggtcgcgagtttcgtctctcccagcggagcgcgggcg
gcaagcgccggcacctatatcctttatgccagccacattgcggccatggcgccggggacg
aatctgggcgccgcgacgccgatcgccatcggcggaggattgtttggcaatgacgagcag
gaaggcgaggaaaagcctggcgatccggacaagccggagcctcgcaaaccggccaatgcc
ggcgaagcgaaactcatcaacgatgcggtcgcctatatccgcggcctcgcggagttgcgc
aaccgcaacgtcgactgggcggagcgggccgtgcgcgaggccgcgagcctttcctccgcc
gcagccgcgcgcgagcaggtcatcgacttcaccgccgtcagcgtcgacgacctcttgaag
caggcccacggccgcgccgtccgcatcggccaatccgatgtccggctcgatacgtccggg
ctcgccatagaggatctgccgccggactggcggacgcgcctgctgtcggtgatcaccaat
ccgaacgtcgcactcctcctgatgatggtcggaatctacgggctcatcttcgagtttctc
gcgcccggcacagtggtgccgggtacaatcggcggcataagcctcctgctcggtctctac
gcgcttgcggtgctgccggtgagctatgccggcgtcggcctcatcctcctcggggcgggg
ctgctggtggcggaggcgcatgcgccgtctttcggcgtgctcggcctcggcggcaccgtt
gccctggtgctgggcgctgccattctcttcgatacggatatgcccggactgcaggtgtcc
tggcctgcactgagcggtattgcgatagccagcctggctttcagtctgctggtcgcccgt
ctcgcccttgtgtcccgccggcacaaggtcgccaccggcgcggaagagatgatcggcatt
tccggcaaggtcgacagttgggcgggagcggacggctacgtgatcgcgcatggcgagcgg
tggagggccgtcagcagtgaatctcttggcccgggagaggacgtgatggtcgtcggccgt
gagggcctcacgctcaaggtggcgcgcaacgctgcgcccggaggagatggagaccgctca
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