Sinorhizobium meliloti 2011: SM2011_b21239
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Entry
SM2011_b21239 CDS
T02497
Name
(GenBank) Putative pectate lysase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smel
Sinorhizobium meliloti 2011
Pathway
smel00040
Pentose and glucuronate interconversions
smel01100
Metabolic pathways
smel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SM2011_b21239
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM2011_b21239
Enzymes [BR:
smel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SM2011_b21239
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GFIT
Motif
Pfam:
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
AGG71756
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Position
pSymB:804155..805603
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AA seq
482 aa
AA seq
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MTVIYHSRDVRAFGFTIARCLILAGLVCGSWVGLSRQALAQAALAEPLSPKLPDGRQRAF
PTAEGFGAGSLGGRGGKVIYVVNTDESGQGSLRACIEASGPRICIFRTGGTIVLRERSLV
VRHPFLTIAGETAPGGGIAIRNGETQTRPSIEIVTNDVIIRHIRLRPGPHAVKACCSGGL
GMYSSSAKDIMLDHISASWGSDETIDSEDASNFTWQWGITSEPLLRGGPGKDKRARNMLF
TKGGNVSVHHSLFAFGQFRNPLIKMKIPGAVADVVNNVFFSPKWQYVLSFGDEWARIQAN
VVGNYKIAGEKLQNDHLVHLFEESGRGHAIYLKDNYDEPYRTGASEDDTLVLAEKQRRFV
SVSAFDAPAVRASAPEIAYEDVLAGAGATKPRRDAVDRRITEAVRNRSGRLLVNDPQDVG
GWPQLDAGVPYPDSDMDGISDDWEVESGTDPADASDGRQDLDGDGWTNLEAFLHFMAGDT
AD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaatctaccactcgcgtgatgtgagggcatttggtttcacgatagcgcgttgc
ctgatattggcggggttggtctgcggatcatgggtcggcctctcgcggcaagctctggcg
caggcagcactggccgagcctctttcacccaagcttccagacggcagacaacgcgccttt
cccacggccgaaggcttcggcgccggctctcttggaggccgggggggtaaggtgatctat
gtcgtcaacacggacgagtcagggcagggctccttgcgtgcgtgcatcgaggcatccgga
ccgcgcatttgtattttccgcacgggcggcaccattgttcttcgcgaaagatcgctggtc
gttcgacatccattcctgacgattgccggagagacggcgccgggcggcgggattgccatc
cggaacggtgagacgcaaactcgcccttcgatcgaaatcgtgaccaatgacgtgatcatc
aggcacattcgtcttcgccccggtccgcatgccgtgaaggcttgttgttccggaggcctc
ggaatgtactccagctcggcgaaggacatcatgctcgatcatatctccgccagctgggga
tcagacgagacgatcgattcggaagacgcgagcaacttcacctggcagtggggtattacg
agcgaaccgctgctgcggggcggccccgggaaagacaagcgtgcgcgcaacatgttgttc
acgaagggcggcaacgtctccgtgcatcactctctcttcgctttcggccagttcagaaat
ccgctgataaagatgaagattcccggcgccgtcgccgatgtcgtgaacaacgtgtttttc
tcgccgaagtggcaatatgtcctaagcttcggcgatgaatgggcgcggatccaggctaat
gtggtcggcaactacaagatcgcgggggaaaagctgcaaaacgaccatttggttcatctc
ttcgaagaaagcggacgcgggcacgcgatctatttgaaggacaattacgacgaaccatat
cgcactggcgccagcgaggatgacaccctcgttctggccgagaaacaaagaaggttcgtt
tcagtgtcggcattcgatgcaccggcggtccgcgcttctgcgcccgaaattgcttacgag
gacgtcctggcaggtgcgggtgcgacgaagcctcggcgcgacgccgtcgatcgccgcatc
accgaggcggtcagaaatcgcagcggacggctgctcgtgaacgatccgcaggacgtcggc
ggttggccgcaactcgatgccggggtgccgtacccggacagcgacatggacggtatctcg
gatgactgggaggtcgaaagcggcaccgatccggcagatgccagcgatgggcgacaggac
ttggatggcgacggatggacaaatctcgaagcgtttctccatttcatggcgggcgatacc
gcggattaa
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