Sinorhizobium meliloti 2011: SM2011_c00878
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Entry
SM2011_c00878 CDS
T02497
Name
(GenBank) Putative transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
smel
Sinorhizobium meliloti 2011
Pathway
smel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smel00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM2011_c00878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smel03000
]
SM2011_c00878
Transcription factors [BR:
smel03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SM2011_c00878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_29
Sigma70_r4_2
FaeA
HTH_23
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGG73406
LinkDB
All DBs
Position
908241..908981
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AA seq
246 aa
AA seq
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MIDFSVDISSLVLPDGHAISGAIDSEDDVRRALGRVSEGFGFRGFMVLAIPESGSHSLTA
QALMTTWPMDFLRRYDSARLIDGSPVIQRLRRSTIPFTYDAHLLARGRVDGKGEAAICVF
EQANMPRGVYLPVHDAAGHRAAIAFGGDRSAVSDDEMQALNLWAGLLYSRLSEVRTRDRR
GPGSLSRREIECLRWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAI
RAGLIN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttcagcgtggatatatcctcattggtcctccctgacggtcacgcaatcagc
ggggcgatcgacagcgaggatgatgtccggcgcgcgctcggccgagtgtcggaaggtttc
ggttttcgcggcttcatggtcctcgccattcccgagtcggggtcccacagcctcactgcg
caggcgctcatgacgacctggccgatggatttcctcaggcgctacgacagtgcacgcctg
atcgacggcagtccggtgatccagcggctgcggcgcagcaccattcccttcacctatgat
gctcatctgctggcgcgcgggcgggtggacggcaagggcgaagctgccatatgcgtcttc
gaacaggcgaacatgccgcgcggggtgtatctgccggtccatgatgccgcgggtcaccgc
gccgccatcgccttcggcggtgacaggtctgccgtatccgacgacgagatgcaggctctg
aacctctgggccggccttctatacagccggctgagcgaagtcagaacgcgcgaccgacgc
ggcccgggcagcctttcccggcgcgagatcgagtgtttgcgctgggccgcggctggcaag
acgacggtggagatggcccgcatcatggcactgtcggaatatacggtgaaccactatctc
aaccgtgcgacgcgcaagctggattcggtcaatcgcgtccaaaccgtcgccaaggcgata
cgtgcagggttgatcaattga
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