Sinorhizobium meliloti 2011: SM2011_c01285
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Entry
SM2011_c01285 CDS
T02497
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase,alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smel
Sinorhizobium meliloti 2011
Pathway
smel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SM2011_c01285 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smel03021
]
SM2011_c01285 (rpoA)
03400 DNA repair and recombination proteins [BR:
smel03400
]
SM2011_c01285 (rpoA)
Enzymes [BR:
smel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SM2011_c01285 (rpoA)
Transcription machinery [BR:
smel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SM2011_c01285 (rpoA)
DNA repair and recombination proteins [BR:
smel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SM2011_c01285 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
AGG73959
LinkDB
All DBs
Position
1491825..1492835
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFASSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLSVFVNFDEPQKETEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaattggcaggaattgatcaagccgaacaaggtggagttcgcctcctcc
ggccgcaccaaggcaacgttggtcgcggagccgcttgagcgcggctttggcctgacgctc
ggcaacgcgcttcgccgcgtcctattgtcgtcgctgcgcggtgctgccgtaaccgcggtt
cagatcgacggcgtattgcatgagttctcttctatcccgggcgtccgggaagacgtgacc
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcaaagcgc
atggtcgtgcgcaagcagggtccgggcgtcgtgaccgccggtgacattcagacggttggc
gacatcgagatcctcaacccgaaccacgtgatctgcaccctcgacgagggcgcggaaatc
cgcatggagttcaccgtcaacaacggcaagggctacgtaccggctgaccgcaaccgctcg
gaagatgcgccgatcggcctcattccggtcgacagcctgtactctccggtcaagaaggtc
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactatgacaagctgacgatg
tccatcgaaaccgatggctccgtcaccggcgaagatgcgatcgctttcgcggcccgcatc
cttcaggaccagctgtcggtcttcgtcaacttcgacgagccgcagaaggaaaccgaggaa
gaggcagtcaccgaactcgccttcaaccccgcgcttctcaagaaggtcgacgaactggag
ctttccgtccgttcggccaactgcctgaagaacgacaacatcgtctatatcggcgacctc
attcagaagaccgaagcagaaatgctccgtacgccgaattttggtcgcaagtcgctcaac
gagatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccgtcctgg
ccgccggagaacatcgaagatctcgccaagcgttacgaagaccagtactaa
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