Sinorhizobium meliloti 2011: SM2011_c02227
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Entry
SM2011_c02227 CDS
T02497
Symbol
fadB
Name
(GenBank) Putative fatty oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
smel
Sinorhizobium meliloti 2011
Pathway
smel00071
Fatty acid degradation
smel00280
Valine, leucine and isoleucine degradation
smel00310
Lysine degradation
smel00362
Benzoate degradation
smel00380
Tryptophan metabolism
smel00410
beta-Alanine metabolism
smel00640
Propanoate metabolism
smel00650
Butanoate metabolism
smel00907
Pinene, camphor and geraniol degradation
smel00930
Caprolactam degradation
smel01100
Metabolic pathways
smel01110
Biosynthesis of secondary metabolites
smel01120
Microbial metabolism in diverse environments
smel01200
Carbon metabolism
smel01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
smel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SM2011_c02227 (fadB)
00650 Butanoate metabolism
SM2011_c02227 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SM2011_c02227 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SM2011_c02227 (fadB)
00310 Lysine degradation
SM2011_c02227 (fadB)
00380 Tryptophan metabolism
SM2011_c02227 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SM2011_c02227 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SM2011_c02227 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SM2011_c02227 (fadB)
00930 Caprolactam degradation
SM2011_c02227 (fadB)
Enzymes [BR:
smel01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SM2011_c02227 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SM2011_c02227 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SM2011_c02227 (fadB)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
2-Hacid_dh_C
NAD_binding_8
FAD_binding_3
Pyr_redox
F420_oxidored
ApbA
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AGG73112
LinkDB
All DBs
Position
complement(587902..590115)
Genome browser
AA seq
737 aa
AA seq
DB search
MSYTNFKIETDADGIALVTWDMPDKSMNVFTEEVMKELDAIIDQTTADPAVKGVVITSGK
SSFSGGADLSMIKSMFTFQAEERKKDPDNAARKLFDLVGRMTGLFRKLETSGKPWVSAIN
GTCMGGAFEMSLACHGRVASNAKSVKIALPEVKVGIFPGAGGTQRVPRLTNTQDALQMMT
TGSSLTPARAKAMGLVHEVVDPDKLIEAAKAMIKNGLKPVQPWDEKGFKLPGGGIWTPAS
AQLWPAASGILRRETYGNYPGAIAILKCVYEGLQVPFDTALKIEQRYFTEILQTTEAFSM
IRSLFVSMQELGKGARRPAGVPKTELKKVGVVGAGFMGASIAYVTAAGGIPVTLIDRDME
AAEKGKTHSEGLVKDAIGKGRLTKEEGEALLSRITPSADYGDLRDAGLVIEAVFEDRQVK
KDVIEKVEAVIAEDAIFASNTSTLPITGLARNSKRPDRFIGIHFFSPVEKMMLTEVILGK
ETGDRALAAALDYVAAIRKTPIVVNDTRGFYVNRCVFRYIHEAYDMLIEGVPPAMIENAA
KMAGMPVGPLSLNDEVAIDLSQKILKAAVADLGDKAVDLRHMALIDKMVDELDRRGRKNG
KGFYEYPAKPARKYLWPGLKELYPQKDAGEIEVGVLKQRLLVTIALEAARTIEEGIVTDP
READVGSILGFGFAPYTGGTLSYIDGMGAKAFVELCEKLAADHGDHFRPTPLLKEMAEKG
ETFYGRFDPYGAGQKAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacacgaacttcaagatcgaaaccgacgccgacggcattgcgctggtcacctgg
gacatgcccgacaagtcgatgaacgtcttcaccgaagaggtgatgaaggaactcgacgcc
attatcgatcagacgaccgcagatcctgccgtcaagggcgtggtcatcacctccggcaaa
tcctccttctccgggggtgccgacctttcgatgatcaagtcgatgttcaccttccaggcc
gaggaaaggaagaaggacccggacaacgcggcccggaaactcttcgacctcgtgggccgg
atgacgggtctcttccgcaagctcgaaacctcgggcaagccctgggtgtcggccatcaac
ggcacctgcatgggcggcgccttcgagatgtcgctcgcctgccacggccgtgtcgcctcc
aatgcgaaatcggtgaagatcgcgcttcccgaggtcaaggtcggcattttcccgggcgcc
ggcggcacccagcgcgttccgcggctgaccaatacgcaggacgcgctgcagatgatgacg
accggctcctcgctcacgccggcgcgggcaaaggccatggggctcgtccacgaggtggtc
gatccggacaagctgatcgaggctgccaaggcgatgatcaagaacggcctgaagccggtt
cagccctgggacgagaagggcttcaagctgccgggcggcggcatctggacgcccgcctcc
gcgcagctctggccggccgcctccggcatcctgcgccgcgagacctacggcaattacccc
ggcgcgatcgcgatcctgaaatgcgtctatgaggggctgcaggttcccttcgatacggct
ttgaagatcgagcagcgctatttcaccgaaatcctgcagacgaccgaagccttctcgatg
atccggtcgctgttcgtctcgatgcaggaactcggtaagggcgcgcgccggccggccggt
gtaccgaagaccgagctcaagaaagtcggcgtcgtcggcgccggtttcatgggcgcctcg
atcgcctatgtaaccgcggcgggcggcatccccgtcaccctcatcgaccgcgacatggaa
gctgccgaaaagggcaagacgcattcggaaggcctggtcaaggacgcgatcggtaaggga
cgcttgaccaaggaggaaggcgaagcgctgctttcgcgcatcacaccttcggcggactat
ggcgatctcagggatgccggcctcgtcatcgaggcggtcttcgaggaccggcaggtcaag
aaggacgtgatcgagaaggtcgaagcggtgatcgccgaggacgcgatcttcgcctccaac
acctcgacgctgccgatcaccggcctcgccaggaattccaaacgcccggaccggttcatc
ggcattcatttcttctcgccggtcgagaaaatgatgctgaccgaggtgatcctcggcaag
gagaccggagaccgtgcgctcgcggccgcgctcgactatgtcgcggcgatcaggaagacg
ccgatcgtcgtcaacgacacgcgcggcttctacgtcaatcgctgcgtcttccgctatatc
cacgaagcctatgacatgctgatcgagggcgtaccgccggcgatgatcgagaacgccgcc
aagatggccggcatgccggtcggaccgctgtcgctcaacgacgaggtggcgatcgacctc
agccagaagatcctgaaggcggccgttgccgatctcggcgacaaggccgtcgatctcagg
cacatggcgctgatcgacaagatggtcgacgagctcgaccggcgcggccgcaagaacggc
aagggtttctacgagtatccggcaaagccggccaggaaatatctctggccgggcctgaag
gagctctacccgcagaaggatgccggcgagatcgaggtcggtgtgctcaagcagcgcctg
ctcgtgacgatcgcactcgaagccgcgcgtacgatcgaggagggcatcgtcaccgacccg
cgcgaagccgatgtcggctcgatcctcggcttcggctttgcgccctacaccggcggcacg
ctctcctacatcgacggcatgggtgcgaaagccttcgtcgagctttgcgaaaagctcgcc
gcggaccatggcgaccacttccggccgacgccgcttttgaaggagatggcggaaaagggc
gaaaccttctacgggcgcttcgacccgtatggcgcggggcagaaggcggcataa
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