Sinorhizobium meliloti 2011: SM2011_c02850
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Entry
SM2011_c02850 CDS
T02497
Symbol
polA
Name
(GenBank) putative DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smel
Sinorhizobium meliloti 2011
Pathway
smel03030
DNA replication
smel03410
Base excision repair
smel03420
Nucleotide excision repair
smel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SM2011_c02850 (polA)
03410 Base excision repair
SM2011_c02850 (polA)
03420 Nucleotide excision repair
SM2011_c02850 (polA)
03440 Homologous recombination
SM2011_c02850 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smel03032
]
SM2011_c02850 (polA)
03400 DNA repair and recombination proteins [BR:
smel03400
]
SM2011_c02850 (polA)
Enzymes [BR:
smel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SM2011_c02850 (polA)
DNA replication proteins [BR:
smel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SM2011_c02850 (polA)
DNA repair and recombination proteins [BR:
smel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SM2011_c02850 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SM2011_c02850 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
IMS_HHH
HHH
Taq-exonuc
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AGG72754
LinkDB
All DBs
Position
complement(198470..201484)
Genome browser
AA seq
1004 aa
AA seq
DB search
MKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVT
PTHLAVIFDYSSKTFRNGLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEA
DDLIATYARLAEEAGADVTIVSSDKDLMQLVTPKVSMYDSMKDKQITVPDVIEKWGVPPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRESIIANA
DLARLSRELVTLKKDTPLDVPPEDFRLDSQDGPKLIAFLKAMEFTTLTRRVAAATDTDAE
AIEPAHVPVEWGAQAHGPDLDVGEAGGPPPSPQSSSATPPRGNAARAAVSFLSSGQDADT
TGATPTGLAEARAAYFGKAPFDHSGYRTIRDIDTLERWIADAREAGLVGFDTQATSPDAM
RADLVGFSLAVADYANDPSGSRIRAAYVPLAHKSGVSDLLGGGPVDSQVPGRETLSRLKE
LLEDPSVLKVGQNLKYGYLVMKRHGIAMRSFDDTMLMSYVLDAGNGAHGMDSLAERWLGH
TPIAYKDVTGTGRSSLTFDFVDIDKATAYAAEDADIALRLWHVLKPRLAAKGLTRVYERL
ERPLISVLAGMEERGITVDRQILSRLSGELAQGAAALEDEIYRLAGETFTIGSPKQLGDI
LFGKMGLPGGSKTKTGQWSTSAQVLEDLAAAGHDLPRKIVDWRQLTKLKSTYTDALPGFV
HPETKRVHTCFAMAATTTGRLSSSDPNLQNIPIRTGEGRKIRTAFVATPGHKLVSADYSQ
IELRVLAHVADIPQLRQAFADGVDIHAMTASEMFGVPVDGMPSEIRRRAKAINFGIIYGI
SAFGLANQLSIERSEAGDYIKRYFERFPGIRDYMENTKAFARENGYVETIFGRRAHYPDI
RSSNPSMRAFNERASINAPIQGSAADIIRRAMVKMEPALEAAKLSARMLLQVHDELIFEV
EDGEIERTIPVIISVMENAAMPALDMRVPLKVDARAAHNWDEAH
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggtgatcatctcttcctcgtcgacggctcgggcttcatcttccgggcgttc
cacgccatcccgccgctcaaccgcaagtcggacggacttcccgtcaatgcggtcgcggga
ttctgcaacatgctctggaagcttttgaccgacgcgcgcgacacctccgtgggcgtgacg
ccgacacatctggccgtgatcttcgactattcctcgaagaccttccgcaacgggctctac
gatcagtacaaggccaaccggacagcgccgccggaggatctgatcccgcagttcgggctc
atccgccacgccacccgcgccttcaacctgccctgcatcgagaaggaaggctacgaggcc
gacgacctcatcgcgacctatgcacggcttgccgaggaggcgggcgccgacgtgaccatc
gtttcctccgacaaggacctcatgcagctcgtcacgccgaaggtgtcgatgtacgacagc
atgaaggacaagcagatcaccgttccggacgtgatcgaaaagtggggcgtgccgccggaa
aagatgatcgatctccaggccatgaccggcgattcgaccgacaacgtgccgggcatcccc
gggatagggccgaagacggcagcccagctcctcgaagagtatggcgatctggacacgctg
cttgcgcgggccggcgagatcaaacagcagaagcggcgcgagtccatcatcgccaatgcc
gatctggcgcgcctttcgcgtgagctcgtgacgctgaagaaagacacgccgctcgacgtt
ccgcccgaggacttcaggctcgattcgcaggacggcccgaagctcatcgcattcctgaag
gcgatggaattcaccacgctcacgcgccgcgtcgcagcggcgacggatacggatgcagaa
gcgatcgaaccggctcatgtgccggtcgaatggggcgcgcaagcgcatgggccggatcta
gacgtcggagaggccggcggcccgccgccgtcgccgcaatcatcgagcgcgacgccgcct
aggggaaatgcggccagggcggctgtctcgttcctctcctccggccaggatgccgatacg
accggcgcgacgcccaccggcctcgccgaggcgcgtgcggcctatttcggcaaagccccg
ttcgaccattccggatatcgcaccatccgcgatatcgatacgctcgagcgttggatcgca
gacgcccgcgaggcggggctcgtcggcttcgatacccaggcgacgtcgcccgacgccatg
cgcgccgacctcgtcggcttttcgctcgcggtcgccgattacgcgaacgacccgtcgggc
tcgaggatcagggcggcctacgtgccgctcgcccataagagcggcgtcagcgacctcctg
gggggtggacctgtcgacagccaggttccgggccgggagaccttaagccggctaaaggag
ctgttggaggacccgtccgtcctgaaggtggggcagaacctgaaatacggctacctcgtg
atgaagcggcatggcatcgccatgcgaagcttcgacgacacgatgctgatgtcctatgtg
ctcgatgccggcaacggcgcccacggcatggattcgcttgccgagcggtggcttggccac
acgccgatcgcctataaggacgtcaccggcaccggccggtcttcgctcaccttcgacttc
gtcgacatcgacaaggcgacggcctatgcggcggaggatgcggatatcgcgctgaggctt
tggcatgtgctgaagccccggctcgccgccaaggggttgacgcgcgtctacgagcggctg
gagcggccgctgatctccgtccttgccgggatggaggaacgcggcataaccgtcgaccgg
cagattctgtcacgcctctccggcgagctggcgcagggggcggcggcgctcgaagacgag
atctatcgcctcgccggcgagacattcaccatcggctcgccgaagcagctcggcgacatt
ctcttcggcaagatgggtcttccgggcggctccaagaccaagaccgggcaatggtcgacc
tccgcgcaggtgctcgaggacctcgcggccgccggacacgacttgccccgcaagatcgtc
gactggcggcagctgaccaagttgaaatcgacctataccgacgccctgcccggcttcgtg
cacccggagacgaagcgcgtccacacctgctttgcaatggctgcgacgacgacggggcgg
ctttcctcctccgatccgaacctgcagaacattccgatcaggaccggcgaaggccgcaag
atccgcacggccttcgtggcgacgccgggacacaagcttgtctcggcggactatagccag
atcgagctgagagtgctcgcccatgtggccgacatcccgcagctgcgccaggctttcgcc
gatggcgtcgacatccatgcgatgacagcttccgaaatgttcggcgtgccggtggacggc
atgccgagcgaaattcgccgccgcgccaaggcgatcaatttcggcatcatctacggcatc
tccgcctttgggctcgccaaccagctttcgatcgagcgttcggaggcgggggattacatc
aaacgctatttcgagcgcttccccggcatccgggactatatggagaacaccaaggccttt
gcccgcgagaacggctatgtcgagacgattttcggccgccgggcccactacccggacatc
cgctcgtccaatccgtcgatgcgcgccttcaacgagcgcgcttcgatcaacgcccccatc
cagggctcggccgccgacatcatccgccgtgccatggtcaagatggaaccggcactcgaa
gcggcgaagctctccgcacgaatgctgcttcaggtccatgacgagctgatcttcgaggtg
gaggatggcgagatcgagcggaccattccggtgatcatctcggtgatggagaacgccgcg
atgcccgcgctcgacatgagggtgccgctcaaggtcgatgcgcgcgcggcacacaactgg
gacgaggcgcattaa
DBGET
integrated database retrieval system
