Streptococcus merionis: SAMEA4412692_0007
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Entry
SAMEA4412692_0007 CDS
T07119
Symbol
recD
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
smen
Streptococcus merionis
Pathway
smen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMEA4412692_0007 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_0007 (recD)
Enzymes [BR:
smen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SAMEA4412692_0007 (recD)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4412692_0007 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
UvrD_C
PIF1
AAA_22
nSTAND3
AAA_28
AAA_5
AAA_29
T2SSE
AAA
DEAD
5_3_exonuc
AAA_16
AAA_12
NPHP3_N
RsgA_GTPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
SNU85936
UniProt:
A0A239SKL0
LinkDB
All DBs
Position
1:complement(6521..8983)
Genome browser
AA seq
820 aa
AA seq
DB search
MEHFFSGTIERVIFENPSNFYKIILLTIEETSDEDYEDIEIIVTGTVADVIEGEDYRFYG
ELIQHPRYGQQLKITRYERSKPSAKGLVKYFASDHFKGIGLKTAERIVKEYGEEDTIDKI
LAKPEKLLDIQGLARAARENFLDKLRLNYGTEMILAKLAEYGISNKLAFQIQDTYKETTL
QVIEENPYQLVEDIRGLGFKLADRIAQALNIESDAPERFRAGLVHSLLSRSLETGDTYVE
ARDLLEATIFLLEDARQVEVSPELVAAELSQLIETGRVQQIGTKIFANSLYFAEEGIQKQ
IQRLLDSPVEQSFETETILAEIANLEKEQGLTYDDLQKEAIVQAINQPIFILTGGPGTGK
TTIINGLIAVYAKLHKINLAKATGESPILLAAPTGRAARRMNELTGLSSATLHRHLGLTG
DAADEISYRNDYLDAELIIVDEFSMVDTWLAHQLLSHISSATQLIIVGDSDQLPSVNPGQ
VLADLLRVTAISHVKLEKIYRQSEDSTIVTLANDIRQGIFPADFTQKKPDRSYFEAEPDH
IPQMVGRIVSAAISSGIKPYDIQILAPMYRGVAGIDQLNKLMQEQLNPLTDGRIEFAFND
LIFREHDKVIHLVNDAESNVFNGDLGYITDLLPAKYTDSKQDELTIQFDGAEISYPRNEW
YKITLAYAMSIHKSQGSEFPVVILPLTNSSRRMLQRNLLYTAITRSKSKLILLGNLSAFD
YATTHTGTARKTYLIQQFNQTIEDEPTTLETKTPKTVTDHQLEPQTSTQQTTLFEIEQNT
TSQAFVQSKEPSSYILTKSNYQNIDPMIGLTTEELRQFFK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaacactttttttcaggcaccattgagcgagtcatttttgaaaatcctagcaacttt
tacaagattatcctcctcacgatcgaggaaactagtgatgaagactacgaggatatcgaa
atcatcgtaacaggaacggtagcagatgtcattgaaggcgaggactaccgcttctacgga
gagctaattcagcaccctcgctatgggcaacagctcaaaatcacacgttacgagcgcagc
aaacccagcgctaaaggtctggtcaaatactttgcgagcgatcatttcaagggtatcggt
cttaaaacggctgagcggatcgtcaaggaatatggagaagaggacaccattgacaagatc
ttggctaagcctgaaaaactccttgacattcaggggctagccagagctgcgcgagaaaat
tttctggacaagctccgccttaattacgggactgagatgattctggccaagctagctgaa
tacggtatttccaataaactggccttccaaattcaggacacctataaggaaaccaccctt
caagtcattgaggaaaatccctatcaactggtcgaagatattcgaggattagggttcaaa
ctcgcagatcgtatcgcccaagcgctcaatatcgaaagcgatgctccagagcgcttccga
gctggactcgtccatagcctgctgagtcgatcgctggaaacaggcgatacttatgtcgaa
gctcgcgatctgctagaggcgactatttttcttctggaagatgcccgacaggttgaagtg
tcacctgaactggtagctgctgagctcagtcagctcattgagacagggagagtgcagcag
ataggaactaagatttttgccaacagcttgtatttcgcagaagaaggcattcaaaagcaa
atccagcgcctgctggacagccctgttgagcagagctttgagaccgagaccatcttagcc
gagattgctaacttagaaaaagagcaaggattaacctacgacgatctgcaaaaagaagcc
attgtccaagccatcaaccagccgatctttatcttgacaggtggtccaggaacaggaaag
acgaccattattaacggtttgattgctgtctatgcaaaattacacaagattaatttggcc
aaagcaactggtgagagtcctattctcctagcggctccgaccggacgagcagccagacgg
atgaatgaactgactggcctatcctcagccactcttcaccgccatctaggactgacagga
gatgccgcggacgaaataagctaccgtaacgattatctggacgccgagctgatcatcgtg
gatgaattttccatggtagatacttggctagctcaccagcttttatcgcatatttccagt
gccacccagctcatcatcgtgggcgatagcgatcagctcccgtctgtcaatccaggccaa
gttctggccgatcttctcagggtcaccgccatttcccatgtcaaattggaaaaaatctac
cgccaatcggaagactcaaccatcgtgactctggccaacgacattcgtcaaggcattttt
ccagctgactttacccagaaaaagcctgatcgctcctactttgaagctgagcccgaccac
attccacagatggtaggacggattgtctctgctgctatttctagcggtatcaaaccttac
gacattcagattttggctcccatgtaccgaggagtggcaggcattgatcaactcaacaag
ctcatgcaagaacagctcaatcccttgactgacggtcggattgaattcgcttttaatgac
ctcatctttcgcgaacacgacaaggttatccatttggtgaacgatgcagagagtaatgtc
ttcaatggtgatttaggctatatcactgatcttctacctgccaaatacaccgacagcaag
caggatgagctaactatccagtttgacggagccgaaatcagctatccgcgaaacgaatgg
tacaaaataaccctagcctacgccatgtccattcacaaatctcagggtagcgagtttcct
gttgtgatattgcctctgaccaacagcagtcgccgtatgcttcagcgcaatctcctctac
accgccatcacccgtagcaaaagtaagctgatcctccttggcaatctctcagcctttgac
tacgctacaacacataccggaactgcgcgtaagacctatctcattcagcaatttaaccaa
acaatcgaagatgaaccaaccacccttgaaactaagacgcccaaaacagtcacagaccac
cagcttgaaccacagactagtacgcaacagacaacgctttttgagatagagcagaacact
acatcccaagcatttgtccaatccaaagagcctagtagctatatcctaacaaagagtaac
tatcaaaatattgaccccatgattgggttgactacagaagagctccgccagttttttaaa
tag
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