Streptococcus merionis: SAMEA4412692_0166
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Entry
SAMEA4412692_0166 CDS
T07119
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smen
Streptococcus merionis
Pathway
smen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4412692_0166 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_0166 (xthA)
Enzymes [BR:
smen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAMEA4412692_0166 (xthA)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAMEA4412692_0166 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
SNU86272
UniProt:
A0A239SM15
LinkDB
All DBs
Position
1:complement(174611..175438)
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AA seq
275 aa
AA seq
DB search
MKLISWNIDSLNAALTSTSPRALLSQAVLDTLALHDADIIAIQETKLSATGPSKKHLEIL
SERFPAYDIAWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPTTMDVEGRIITLEFD
NCFVTQVYTPNAGDGLRRLAERQIWDEKYADYLAELDAVKPVLATGDFNVAHKEIDLAHP
SSNRQSPGFTDEERLGFSNLLAKGFVDTFRYLHGDVLNAYTWWAQRSKTSKINNSGWRID
YWLTSARIAKAIKRSEMIDSGTRQDHAPILLEIDL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatttcttggaacattgattccctaaacgctgccttgaccagtacatcacca
cgcgctttgttgtcacaagcagtgctcgatactctagcactccacgatgctgatatcatc
gctattcaggagaccaagctctctgcgactggtccaagcaaaaaacacttggaaattctg
tctgagcgttttccagcttatgatatcgcttggcgttcttctgtcgagccagcccgcaaa
ggctatgctggaaccatgtttctctacaaaaaagaactgacccccgtcattacctatcct
gaaattggtgcaccgacaactatggatgttgaggggcggatcatcacactggaatttgac
aattgcttcgtaacacaggtctatactccaaatgctggagatggccttcgccgtctcgct
gagcgtcaaatttgggatgagaagtatgctgattacctagctgaactagatgctgtcaag
cccgttcttgctacaggtgactttaacgttgcccacaaggaaattgatctggctcatcct
tctagcaaccgccaatcaccaggtttcactgatgaagagcgccttggcttttccaacctc
ttagcaaaaggttttgttgacaccttccgttaccttcatggtgacgttcttaacgcctac
acctggtgggcacagcgtagcaagaccagcaaaattaacaattctggctggagaatcgat
tattggttgaccagcgctcgcattgccaaagctattaaacgctctgaaatgattgactca
ggaactcgtcaagaccatgccccaattcttctggaaattgatttataa
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