Streptococcus merionis: SAMEA4412692_0553
Help
Entry
SAMEA4412692_0553 CDS
T07119
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smen
Streptococcus merionis
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smen03016
]
SAMEA4412692_0553 (truB)
Enzymes [BR:
smen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAMEA4412692_0553 (truB)
Transfer RNA biogenesis [BR:
smen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMEA4412692_0553 (truB)
Prokaryotic type
SAMEA4412692_0553 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Imm1
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
SNU87204
UniProt:
A0A239SR35
LinkDB
All DBs
Position
1:595953..596846
Genome browser
AA seq
297 aa
AA seq
DB search
MISGIINLKKEAGMTSHDAVFKLRKILKEKKIGHGGTLDPDVTGVLPIAVGKATRMIEFM
QEEGKVYEGEITLGFSTTTEDASGEVVERTPVPASGEITESMVDDAMASFVGPITQIPPM
YSAVRVNGRKLYDYARAGEEVTRPKRQVTIHFFERTSELRVVGELVQFDFRVKCSKGTYV
RTLSVDLGAKLGYASHMSRLVRTSASGMDLSDSVTLDDIKTKVAAEDWSFLYPIEKAVGD
LPQVEVTAEQAQDISHGRFIPLANQEQVTLAAFFAGKLLAILEKRQEEYKPRKVFKD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaggaattattaaccttaaaaaagaagctggaatgaccagccatgacgcagtt
tttaagctgcgcaagattttgaaagaaaagaaaattggtcacggtggaaccttggaccca
gatgtgacaggtgttttgcctattgctgttgggaaagccactcgtatgattgagttcatg
caggaggagggcaaggtctacgagggagagattaccctcggtttttcgaccacaactgag
gatgcttcaggtgaagtggttgaaaggacacctgtacctgcttcgggggaaatcactgag
tccatggtggatgacgcgatggctagctttgttggtccaatcactcagattccacccatg
tactcagcggtcagggtcaatggccggaagctttatgactatgcgcgtgcgggcgaggag
gtcacacgtcctaagcgtcaggtgacgattcatttttttgaacgaaccagtgaattgcgg
gtcgtaggagagctcgtgcaatttgattttcgggtgaaatgtagcaagggaacttatgtt
cgaacactgtctgttgatcttggagcgaagctaggttacgccagccatatgtcacggctg
gtaagaacatcagcatctgggatggacttatcggacagtgtgaccttggacgacatcaag
accaaggtggctgcggaagactggtcttttctttatcctattgaaaaggctgttggtgat
ctgcctcaagttgaagtgactgctgaacaagcgcaggacatcagtcatggacgctttatt
ccactagcaaatcaagaacaggtgaccctagcagcattttttgcaggcaagttattggcc
attttagaaaaacgacaagaagaatacaaaccacgtaaggtctttaaggattaa
DBGET
integrated database retrieval system
