Streptococcus merionis: SAMEA4412692_0639
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Entry
SAMEA4412692_0639 CDS
T07119
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smen
Streptococcus merionis
Pathway
smen03030
DNA replication
smen03430
Mismatch repair
smen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4412692_0639 (dnaE)
03430 Mismatch repair
SAMEA4412692_0639 (dnaE)
03440 Homologous recombination
SAMEA4412692_0639 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smen03032
]
SAMEA4412692_0639 (dnaE)
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_0639 (dnaE)
Enzymes [BR:
smen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4412692_0639 (dnaE)
DNA replication proteins [BR:
smen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4412692_0639 (dnaE)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4412692_0639 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SNU87407
UniProt:
A0A239SPS6
LinkDB
All DBs
Position
1:680222..683335
Genome browser
AA seq
1037 aa
AA seq
DB search
MFVPLDTKTVYSFMDSVIGIETYVAKGKAMGYQALGMMDVDNLYGAYHFLEACQRAGIRP
ILGVEMTLQWNEQPIKVYAIAQDTLAYQALMKLSTQKMMGEENFEKLRHLLEKITLVLPY
HDGIDQLDIGLPYYIGVYPETPQQSFQRPILPLHTVRYFDLEQRSIIQMLHAIRDNQSLQ
ETAPVLGQEVLLPSGEMAELFREKFPDALENLERFVSSIKYQLNQSLVLPRFNRERPAVE
ELRERAFEGLSERGLSSPVYQERLEQELSVIHQMGFDDYFLIVWDLLRFGRSQGYYMGMG
RGSAAGSLVAYVLNITGIDPVEKNLLFERFLNLERFSLPDIDIDMPDVYRPEFIRYVREK
YGSRHAAQIVTFSTFGAKQAIRDVFKRFGLAEYELTNLTKKIGFRDSLKTAYERNASLRQ
VIVGKPEYQRAFEMAQAIEGQPRQTSIHAAGVVMSDRDLTDRIPLRQGEEMYLTQYDAHG
VEANGLLKMDFLGLRNLTFAQRMQEKVAEKYGVVIDVSKIDLEDPDTLALFARGQTKGIF
QFEAAGAISLLKRVKPVCFEDVVATTSLNRPGASDYIDNFIKRRRGKERVDLLDPSIADI
LEPTYGIMLYQEQVMQIAQRYAGFSLGKADLLRRAMGKKKPEEMQAMADDFLSGAMARGH
EERKAQQIFAMMGKFAGYGFNRSHAFAYSALAFQLAYFKAHYPDVFFDVMLNFSSSDYIE
DALNFGFKVAQLHINTVPYYDKFDQGQIHLGLKNIKGLSRDFSHWILENRPFDSVEDFVH
RLPENFAKPVLLEPLIKIGLFDQFEKNRHKILANYQGLREHNKLGQANLFEDNPDMAYSW
TEVADFSEIEKFHQEQEIMGIGLSPHPLVKLSKNAALSITPIRDLVAEGNSRIMVEVLDI
RVIRTKKGDQMAFVKVTDTQNQMEITVFPEAYLQWGRKLEIGGFYYLSGKIQERDGRLQM
LLEHAEQVPTERFWIQMDSHDQDQEVADLLKQFSGPIPVVLRYPSTGETISPKHLGIRKT
ESLEEEFSKRKMKTIFY
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcccattagatacgaaaaccgtctacagttttatggatagtgtgattggtatt
gagacctatgttgctaaaggcaaggcgatgggttatcaagctctcggcatgatggatgtt
gacaatctttatggcgcttatcactttttggaggcttgccaaagagcaggtatccgcccg
attttaggggtggagatgactttgcagtggaatgagcagcctattaaggtttatgctatc
gctcaagacacgctagcatatcaggccttgatgaagctctcaactcagaagatgatggga
gaggaaaattttgagaaacttcgtcatctcttggaaaaaataacgctcgttttgccttat
cacgatgggattgaccagcttgatattggtctaccatattatatcggcgtttatcctgag
acaccgcaacaaagctttcagcggcctattttaccacttcatacggtaaggtattttgat
ttggagcaacgtagtattatccagatgctccatgccattcgggataatcagagtttgcag
gagactgcaccagtcttgggacaggaggtgcttttaccttctggtgaaatggcagagctg
tttagggagaaatttccagatgctcttgagaatttagaacgatttgtctcctctataaag
tatcagcttaatcaatccttggtcttgccacggtttaatcgtgagcgaccagctgtggaa
gaattgcgagagagagcctttgaaggcttatcagaaagaggtctatcaagtccagtttac
caagaacggctggaacaggagttgtctgtcattcaccaaatgggctttgatgattatttt
ctcatcgtttgggatcttttgcgcttcggccgaagtcagggctactatatggggatggga
cgtggttcagcagcagggagcttggttgcctatgttctaaatattacaggtattgatcct
gtcgaaaaaaatctgctctttgagcgatttctcaatctagaacgctttagcttgcctgat
attgatattgatatgcctgatgtttatcggcctgagtttatccgttatgtccgtgaaaaa
tacggtagtcggcatgctgcgcaaatcgtcaccttctcaacctttggagctaagcaagcc
attcgtgatgtcttcaaacgttttggtctggctgaatatgaattgaccaacctgactaag
aaaatcggatttagagatagtttaaagacagcttatgagcgtaatgctagccttagacag
gtgattgtcggtaagccagagtatcagagagcttttgaaatggctcaggccattgaaggt
caacctcgccagacttctatccatgccgcaggagtggtgatgagtgacagggacttgact
gatcgcatcccgcttaggcaaggcgaagaaatgtacctgacgcaatatgatgctcatggt
gtcgaagctaacggcctgctgaaaatggattttctaggactccgtaacttgacatttgct
cagcgtatgcaggagaaagtagctgaaaaatatggtgttgtcattgatgtttctaagatt
gacttagaagaccctgacaccctagctctttttgctagaggccagaccaaggggattttc
cagtttgaagctgcgggagcgatctctcttttaaaacgtgtcaaaccagtttgctttgaa
gatgtcgttgcgacaacgtcgcttaaccgccctggtgctagtgattacattgataatttt
atcaaacgccgtcggggaaaggagcgcgtcgatcttttagatccgagcattgcagatata
ttggagccaacctatggcattatgctctatcaagagcaagtcatgcagatagcccagcgc
tatgcaggttttagtcttggcaaagccgatctcttacggcgggctatgggcaagaaaaag
ccagaagaaatgcaggctatggctgatgactttctgtccggtgctatggcgcgtggtcat
gaggagagaaaagcccagcaaatttttgctatgatgggaaaatttgccggctatggcttt
aaccggtcgcacgcttttgcctactcagccctagcctttcagctggcttatttcaaggcg
cactatcctgatgtcttttttgatgtcatgctaaatttctctagcagtgactatattgaa
gatgcgctaaactttggcttcaaggtagcccagcttcatatcaacactgttccttattat
gacaaattcgatcaagggcaaattcatcttggactgaaaaatatcaaggggctatcccga
gatttttcacactggattttagagaatcgtccatttgatagcgtagaggactttgttcat
cgtcttccagaaaattttgctaagccagtcctgttggaacctttgatcaaaatcggtctg
tttgaccaatttgaaaaaaaccgtcacaagattttggcgaattaccaaggactacgggag
cataacaaactcggtcaggctaatctgtttgaggacaatccagatatggcttatagctgg
actgaagtggcagatttttctgagattgaaaaattccatcaggagcaggagattatgggt
atcggactaagtcctcatcccttggtcaaattgtcaaaaaatgctgcactatctatcaca
ccgatcagagatcttgtagcagaaggtaatagtcgcatcatggttgaagtcttagacatt
cgcgttattcggacaaaaaaaggcgatcaaatggcctttgttaaggtaacggacacccaa
aaccagatggagatcacagtctttcctgaagcctatcttcaatggggacgaaaacttgag
ataggaggtttttattatctatctggtaaaattcaagaaagagatgggcggcttcagatg
cttttggagcatgctgagcaagtcccgactgaacgattttggatacagatggacagccat
gatcaggatcaagaagttgctgatctgttgaagcagttttcagggccaattccagttgtt
cttcgctacccttctacaggtgagactatttcaccaaaacaccttgggattaggaaaacg
gaatcattggaagaggaattttccaaacgaaaaatgaaaacgattttttactaa
DBGET
integrated database retrieval system
