Streptococcus merionis: SAMEA4412692_1048
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Entry
SAMEA4412692_1048 CDS
T07119
Symbol
addA
Name
(GenBank) exonuclease RexA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
smen
Streptococcus merionis
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_1048 (addA)
Enzymes [BR:
smen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4412692_1048 (addA)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SAMEA4412692_1048 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
KdpD
ResIII
PIF1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SNU88414
UniProt:
A0A239SUK2
LinkDB
All DBs
Position
1:complement(1126409..1130077)
Genome browser
AA seq
1222 aa
AA seq
DB search
MPFSPFLSPAEIAELQIQEAQSDKTQKRTPEQIEAIYTHGQNILVSASAGSGKTFVMVER
IIDKIKRGIKISQLFISTFTVKAAGELKERLEKKLSTEIAMTTDLDLLQHLSQQLADVQS
ADIGTMDAFTQKLVSQYGYLLGIAPQFRILTDKSEQDLLKQEVFSQLFETYYEGESREDF
VRLVQNFSGTSKSTKAFQQVVDKIYSFTQSTSDPEGWLEDVFMKGYETFQTEADLPDQIK
ESLLAKMQQTAQNLEDLTNLPDYKQVTAKGEPTAAYKKHQAIFTQLYEWSTGAEFYPSLS
DLAQNVSLLIPSGTDVTVKGVKYPIFKSLQAELTQLQHLSTILEYQGQALPILQLLRRFV
QDFSEAYLARKIQEGTFEFSDISHFAIRILREFDEVRELYQERYHEVMVDEYQDNNHTQE
AMLDLLSNGQNRFMVGDIKQSIYRFRQADPQIFNQKFKEYQEDPKAGKLILLKENFRSQG
EVLEATNSLFSHLMDEEIGDIRYDSTHRLVAGSDRQKLAQPANVTEFLIYDTDSETDLES
TSDDIKASEDDGLADLGFKEINLVIKEIIRLHNDEQVPFEDITLLVPSRTRNNGILAAFA
QQGIPLVADGGEQHYLKSLEVQIMLDTLRTTNNPLNDYALVALLRSPMFGFDEDELTRLA
LQIRQERNSAYLYEKLQVALEATGEAPELITPALKTKIQAFEATLQDWRQAAKLRSLYDL
IWRIYNDKFYYDYVGALPNGEQRQANLYALAFRADQFERTGFKGLSRFIGMIDKVLDSDN
DLADVPVSLPKKAVQLMTIHKSKGLEFKYVFLLNMDKSFFSNKREQSSPLLISRQNGVGI
KLLADMKDHFGDRTPLPRLRVSMETLPYQMAKKEEHISALSESMRLLYVAMTRAETKLYL
VGKGSQKKLTERYDGKTERGLLPVNAREQLDSFQDWFLAVAEAFGSKEDLHYQVTYVGAE
ELTAEQIGRLTLTQNINPDHLAHNRQSADISAMLDQLEEVERLNQHYKAASQLPTVRTPS
QVKTFYKPVLDEEGLDIMDQVGADREAELTFDLPTFGQNAPITSAAVGSALHGFMQRLPL
AQDLSLSQLQAILENMHLPDDVKARLDLQKILTFFETDLGKLLQAHAAQVKREAPFAMLV
QDPVSQEDFVVRGIVDGYIVLQDRIVLFDYKTDRYQTPQVIVNRYRDQMALYAQALTRAY
GISQVDQYLILLGGEKLEVVKI
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgccattttcaccttttttgagtcctgcggaaatagcagagctccaaattcaggaagcc
cagtctgataagactcaaaagcgcacgccagagcagattgaggccatctatacccatgga
caaaatatcttggtttcagcttcggcaggctctggtaaaacctttgtcatggttgagcgg
atcattgataaaatcaagcgtggaatcaagattagtcagctttttatttcgacctttacg
gtcaaggcagctggcgagctcaaggagcggttggaaaagaaattgtctacagagattgcc
atgaccacagatctcgaccttctacaacacctgagtcagcaactggcggatgtccagtca
gctgatattggaaccatggacgctttcacacagaaattggtcagccaatacggctatctg
ctgggaattgcacctcagtttcggattttaactgataagagtgagcaagacctgcttaaa
caggaagtctttagccaattgtttgagacttactatgagggagaatcgcgagaagacttt
gtccgcctagttcagaatttttcaggaaccagcaaatcaaccaaggcttttcagcaggtg
gtcgataagatttatagcttcacccagtcgaccagtgaccctgagggctggcttgaagac
gtttttatgaaaggttacgagaccttccagactgaggccgatttgccagaccagataaag
gagagtcttctagcaaagatgcagcagaccgctcagaatctggaggatttgaccaattta
ccagactacaagcaggtgactgccaagggtgagccgactgctgcttacaagaaacatcaa
gctatttttacccagctctatgagtggagtacaggagcggagttttaccctagcttgtca
gatttggctcagaatgttagtcttttaatcccatcagggacagacgtaaccgtcaaaggg
gtcaaatacccgattttcaagagtttgcaggcagagttgacccaattacagcatttatcg
acgattttggaataccaaggacaggctctgccgattttgcagctgcttcggcgcttcgtt
caggacttttctgaggcttatttggcccgcaagattcaggagggaacctttgagttttca
gatatcagccattttgctattcggattttaagggaatttgacgaggtcagagagctgtat
caggagcgttaccacgaggttatggttgatgagtatcaggacaataaccatactcaggaa
gctatgttagatctcttgtccaatggtcagaatcgtttcatggtgggggacatcaagcag
tccatctaccgtttccggcaggcggatcctcaaattttcaatcagaaatttaaggaatac
caagaagaccctaaagcaggcaagctaatcctgctcaaggaaaatttccgaagtcagggc
gaggtgttagaagcgaccaatagcctgtttagtcatttgatggatgaggagataggtgat
attcgctatgacagcactcacaggctggtagcaggaagtgaccggcaaaaactcgctcag
cctgccaatgtgactgagtttctcatttatgatacagatagcgagacagacttggagtct
acttctgatgatatcaaagctagcgaggatgatggattggctgacctaggtttcaaggag
attaacctcgtcattaaggagattatccgtctccacaatgacgagcaggtgccttttgag
gatataactctgctagtgccatctcggacccgtaacaatgggattttagccgcctttgct
caacagggtatccctctggtagcagatggaggggagcagcactacctcaaatccttagag
gttcagatcatgctggatactttgcgaaccactaacaatccgctcaatgactatgctctg
gtcgcccttctgcgctcgcccatgtttggttttgatgaggatgagttgactagactggct
cttcaaatcaggcaggagcgaaactctgcctacctttatgagaaattgcaggtggcgctc
gaagccacaggcgaggcgcctgaactgattacgcccgctttgaagactaagatacaggcc
tttgaagcgaccttacaggactggcgccaagcagctaaactcaggagcctctatgacctc
atctggcgaatttataacgacaagttttactatgactatgtgggcgctctgcctaacggt
gagcagcgtcaggctaatctttacgctctagcattcagagctgatcagtttgagcggaca
ggtttcaagggactttctcgctttattggcatgattgacaaggttttagatagcgataac
gatctggcagatgttccggtcagcttgcctaaaaaggctgttcagctgatgaccattcat
aagagtaaggggttggagtttaagtatgtcttcctgctcaatatggacaagtctttcttt
agcaacaagcgtgagcagagttctcctctgctgattagccgccaaaatggtgttgggatt
aaactcctagctgacatgaaagaccactttggtgacagaactccgcttcctcgcttgcgc
gtctctatggaaaccttgccctaccaaatggccaaaaaagaagaacacatcagtgcttta
tcagaaagtatgcggcttctctatgtcgccatgacacgtgctgagaccaaactctatctg
gtcggaaagggcagtcagaaaaaattaacagagcgctatgatggcaagactgagcgaggt
cttttgccagtcaatgccagagagcagttagattctttccaagattggtttttagcagta
gcagaagctttcggtagcaaggaagacctccactaccaagtgacctatgtaggagcagaa
gaactaaccgcagagcaaatcggtaggctgacgctaacgcaaaacattaatccagaccat
ctagcccacaaccgccaatcagcagacatctcagccatgctggaccagcttgaagaagtt
gaaaggctcaaccagcactacaaagctgcctcccagcttccaaccgtacgtacgcctagt
caagtgaaaacgttctacaaaccagtcctagatgaggaggggctagacatcatggatcag
gtaggagcagaccgagaggctgagttgacctttgatctgccaacctttggacaaaacgct
ccgattaccagcgctgcggtcggctctgccctccacggcttcatgcagcgtctgccgctg
gctcaagaccttagtctcagtcagctccaagccatcttagaaaacatgcatctgccagac
gatgtcaaagcgcgtctcgatttgcagaagatattgaccttctttgagacggatctcggc
aagctcttacaggctcatgcggctcaagtcaaacgggaggcgccctttgccatgctagtc
caagaccctgtcagtcaagaagactttgtcgttcgtgggattgttgatgggtatatagtc
ttgcaggaccgcatcgttctctttgactataagactgaccgctatcaaacccctcaggtc
atcgtcaaccgttatcgtgaccaaatggctctctacgctcaagccctgactcgtgcctac
ggcatcagtcaggtcgatcagtacctaatcttgctgggtggagaaaagctcgaggttgtt
aagatttag
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integrated database retrieval system
