Streptococcus merionis: SAMEA4412692_1149
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Entry
SAMEA4412692_1149 CDS
T07119
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smen
Streptococcus merionis
Pathway
smen03420
Nucleotide excision repair
smen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4412692_1149 (pcrA)
03430 Mismatch repair
SAMEA4412692_1149 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_1149 (pcrA)
Enzymes [BR:
smen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4412692_1149 (pcrA)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4412692_1149 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4412692_1149 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
Pox_VLTF3
ResIII
Rol_Rep_N
Motif
Other DBs
NCBI-ProteinID:
SNU88619
UniProt:
A0A239STN1
LinkDB
All DBs
Position
1:complement(1246190..1248463)
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AA seq
757 aa
AA seq
DB search
MQNSLLQGMNDRQAEAVQATEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAIT
FTNKAAREMRERAFQLNPATQESLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTL
MKRILKELNLDSKKWNERAILGTISNAKNDLIDEVAYENMAGDMYTQIVAKCYKAYQREL
RQSEAVDFDDLIMLTLRLFDQNPDVLTYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFK
NICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANEVIQNNR
HRREKKLWTQNPDGEQIVYYRATDEQDESVFVARTIDDLKREEDYHYRDFAVLYRTNAQS
RTIEEALLKSNIPYTMVGGTKFYSRKEIRDIIAYLNIIANPADNISFERIINEPKRGVGP
GTLDKLRAFASQEGSSLLDASQNILLSPIKGKAAGAIFELANLIDYLRVSLDSLSVSEVV
EKVLDNTGYTAALAAQQTPESENRLENIQEFLSVTKNFDEKAQESSEEETGLERLSRFLN
DLALVADTDDGDATSNEITLMTLHAAKGLEFPVVFVIGMEEDVFPISRAKEDEDELEEER
RLAYVGITRAEQRLYLTNASSRLLYGRTNYNRPTRFLSEISSDLLDYQGYARPADTSFKV
SYVNGAAPTFGQGMSLAQALQTRKAQAVPQASAKAANTASSKPSINWQVGDTAHHKKWGD
GIVLEVSGSSSAQELKINFPEVGLKKLLASVAPIEKK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaactcattattacaagggatgaatgaccgacaagcagaggctgtacaggcgact
gaggggccgcttttgatcatggcaggagcaggatctggtaagacgcgcgttctaactcac
cgaatagcctacttgattgatgagaagatggtcaatccatggaatattttggcaatcacc
tttaccaataaggcggcgcgtgagatgcgtgagcgagcgtttcaactcaatccggctact
caggagagtctgattgcaacatttcactcgatgtgtgttcgtattttaagaagggatgct
gaccatatcgggtataatcgcaactttaccattgttgatccaggtgagcaacgcaccttg
atgaagcgaattttgaaggaactaaatctggattctaaaaaatggaatgagcgggctatt
cttggaacgatttccaatgccaagaatgacttgattgacgaagtggcttatgaaaatatg
gctggggacatgtacactcagatcgttgctaagtgttacaaggcttatcagagagaactg
cgccagtcagaagcagttgactttgatgatttgatcatgctgacgttgcgactctttgac
cagaatcctgatgtgttgacttattatcagcaacgctatcagtatatccatgttgacgag
tatcaggacacgaaccatgctcagtaccaattggtaaaactcctagcttctcgttttaaa
aacatttgtgtggttggagatgctgatcagtctatctatggctggcgtggagcagatatg
caaaatatcctcgattttgaaaaggattacccagaagctaaggttgtgctgttagaggaa
aactatcgctctaccaagaaaatccttcaagctgctaacgaggttatccaaaataaccgt
catcgccgtgagaaaaagctctggactcaaaatcctgatggggagcagattgtttattat
cgagcgacggatgagcaggatgagtctgtctttgttgcaagaaccattgatgacctcaag
cgggaggaagattaccattaccgtgattttgccgttctctatcgaaccaatgcgcagtcg
cggactattgaggaagcgttgcttaagtccaatattccttatacgatggtcggtgggacg
aagttctactctcgtaaagaaatccgtgacatcattgcctacttgaacatcattgctaat
ccggctgataatatcagtttcgagaggattatcaatgaacctaagcgtggtgtagggcct
ggtacattggacaaactacgtgcgtttgcgagtcaagaaggaagctcgcttttagatgcc
agtcaaaacattctcctgtctccgattaagggaaaggcagcaggtgccatctttgaacta
gctaatttaattgattatcttagggtgagcttggatagtttgagtgtgtctgaggttgtt
gaaaaagtcttggacaatacgggttatacagctgccttagctgctcaacagactcctgag
agtgaaaaccgtctggaaaatattcaagagtttctctctgtcactaaaaactttgatgaa
aaagctcaggagtcatctgaagaggagactggacttgaacgccttagccgttttctcaat
gaccttgctctggttgctgatacagatgatggcgatgctactagcaatgaaattaccctc
atgacccttcatgcggccaagggcttggaattcccagtcgtctttgtcattgggatggag
gaagatgtctttccgatcagtcgtgccaaggaagacgaggatgagctggaagaggagcgc
cgcctggcctatgtcggtatcacacgagctgagcaacgcctttatctgaccaatgcgagc
tctcgtctcctctacggacgcaccaactacaaccgtccaacccgttttctcagtgaaatt
tccagcgacttgctagactatcaaggttacgcccgtcctgctgatactagctttaaggtt
tcctatgtcaatggggctgcgccaacatttggacaaggcatgagcttagctcaagctctc
caaacccgtaaggctcaagctgtgccgcaagcgtctgcaaaagctgccaatacagcttca
tccaaaccaagcatcaattggcaagtcggcgatactgcgcaccacaaaaaatggggagat
ggcattgtacttgaagtttcaggtagtagcagtgcccaagaacttaaaatcaattttcca
gaagttggtctcaaaaaactgctagccagtgttgcaccgattgaaaagaaataa
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