Streptococcus merionis: SAMEA4412692_1230
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Entry
SAMEA4412692_1230 CDS
T07119
Symbol
hupB
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
smen
Streptococcus merionis
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smen03032
]
SAMEA4412692_1230 (hupB)
03036 Chromosome and associated proteins [BR:
smen03036
]
SAMEA4412692_1230 (hupB)
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_1230 (hupB)
DNA replication proteins [BR:
smen03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAMEA4412692_1230 (hupB)
Chromosome and associated proteins [BR:
smen03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SAMEA4412692_1230 (hupB)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SAMEA4412692_1230 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
HU-DNA_bdg
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
SNU88784
UniProt:
A0A239SVM9
LinkDB
All DBs
Position
1:complement(1336006..1336281)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKQDLIAKVAEATGLTKKDSTAAVDAVFASVSDYLAAGEKVQLIGFGNFEVRERAARK
GRNPQTGKEITIAASKVPAFKAGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaacaagatttgatcgcaaaagtagcagaagctacagggttgactaagaaa
gattcaacagctgctgttgatgcagtatttgcatcagtatctgactaccttgcagctggt
gaaaaagttcaattgatcggtttcggtaactttgaagtacgtgaacgtgctgctcgtaag
ggtcgcaacccacaaactggtaaagaaatcacaatcgcggcatcaaaagttccagcgttc
aaagctggtaaagcccttaaagacgctgttaaataa
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