Streptococcus merionis: SAMEA4412692_1594
Help
Entry
SAMEA4412692_1594 CDS
T07119
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
smen
Streptococcus merionis
Pathway
smen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4412692_1594 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_1594 (uvrA)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4412692_1594 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4412692_1594 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
AAA_29
nSTAND1
AAA_21
AAA_22
AAA_23
AAA_33
AAA_18
ATPase
nSTAND3
Viral_helicase1
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND6
NACHT
AAA_15
MMR_HSR1
NB-ARC
Septin
cobW
NTPase_1
MeaB
PRK
DUF87
IIGP
DUF463
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
SNU89705
UniProt:
A0A239SW24
LinkDB
All DBs
Position
1:complement(1716400..1719222)
Genome browser
AA seq
940 aa
AA seq
DB search
MQDKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGNMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTATEINDYLRLLYARIGVPY
CINGHGAISATSVEQIVDQILELPERQRLQILAPVVRKKKGQHKNMLDKIQKDGYVRVRI
DGELHDVAEVPELNKNLAHNIEVVIDRIVIKDGIRSRLFDSVEAALRIADGYVIIDTMDE
KELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGSKLEVDVDLVVPDQSKTL
REGALVPWNPISSNYYPQMLEQAMLAFGIDMDTAFKDLDKASQDLILNGSNGEIFHFHYE
NEFGGVRDIDVPFEGILTNIMRRYRETNSDFTRGQMRLYMNELTCATCQGYRLNDQALCV
KIGGQDGLHIGALSDLSIADHLSLVKDLNLSANEETIARPILKEITDRLTFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLINSLKKMRDLG
NTLIVVEHDEDTMMAADYLIDIGPGAGKFGGEIVAAGTPKQVAKKKNSITGQYLSGKRQI
AVPLERRSGNGRFLRVTGATEHNLQNVTATFPLGKFIAVTGVSGSGKSTLVNSILKKGIA
QKLNRNSAKPGKHKTIEGIEHIDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKVRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGRRYNSETLEVHY
KEKNISEVLDMTVNDAVEFFRHIPKIARKLQTIQDVGLGYVSLGQPATTLSGGEAQRMKL
ASELHKRSTGKSFYILDEPTTGLHTEDISRLLKVLERFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGQIIATGTPEEVAANPASHTGHYLKAKL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataagattgtgattcatggcgctcgcgcccataatttgaagaatattgatgtg
gaaattccgcgcgacaagctggtcgtggtgacgggattgtcaggttctgggaagtctagt
ctagcttttgatacgctctatgctgagggacaacgccgctatgtagagagcctttcggcc
tatgcgcgtcaatttttgggcaatatggataagccagatgtagatagtattgatggactc
tcaccggctatttctattgaccaaaagacaacctctaaaaatccgcgttccacagtagga
acggcgactgagattaacgattacctccgcctcctctatgctcgcattggggttccctac
tgtatcaatgggcacggggctatctcagcaacctcggttgagcagattgtggatcagatt
ttggaattaccagagcgtcagcgcctgcagattcttgccccggttgtccgcaagaagaaa
ggccagcacaagaacatgctggacaaaatccaaaaggatggctatgtgagggtgcggatt
gacggtgagttgcacgatgtggcagaagtgccagagctcaataaaaacttagcccacaac
attgaagtggtcattgatcgtatcgtgatcaaggatggcattcgtagccgtctttttgac
tcagtcgaggcagccttacgcattgcagatggctatgttatcattgataccatggatgag
aaagaacttctcttttcagagcactatgcttgtccagtttgtggctttaccgtgcctgaa
ttggaacctcgccttttttctttcaatgccccttttggctcctgcagtgattgtgacggt
cttgggagcaaactcgaggtcgatgtcgacttggttgtgccagatcagagcaagacccta
cgcgagggggctttagttccttggaatcctatttcgtctaactattacccgcaaatgcta
gagcaggctatgttggctttcggcattgatatggacacggcttttaaagatttggacaag
gcgagtcaggaccttattctgaatggctctaatggcgagattttccactttcattatgaa
aatgaatttggtggcgtgagggatattgatgttccctttgagggtattttgacgaatatc
atgcgacgttaccgtgagactaacagtgattttaccagaggacagatgcgactttatatg
aatgagttgacctgtgctacctgtcagggctaccgcctcaatgaccaagcgctctgtgtt
aagattggagggcaagacggtcttcatatcggagccttgtcagacctatcgatcgcggac
catctgagtctagtcaaagacctgaacttatctgccaacgaggagaccattgcacggcct
atcctcaaggaaattacagatcgcttgactttcctcaataacgttggccttaactacctg
accttgtcacgagctgcgggtacactctctggtggggaaagccaacggattcgtttagcg
actcagattggctccaacctttcaggtgtcctctatatcttggatgagccatctattggt
cttcatcagcgggataatgaccgtctcattaactctctgaaaaagatgcgcgacctagga
aatactctcattgtggtggaacacgatgaggataccatgatggcagctgattatctgatt
gatatcggaccaggtgctgggaagttcggcggggaaattgtggccgcaggcacaccaaaa
caagtcgctaagaaaaaaaattctattactggccagtatctatctggtaaacgccagatt
gcagtgccattagaacgccgttcaggtaatggccgttttctccgtgtgacgggtgcaacc
gagcataatttgcagaatgtcacagcgactttcccacttggaaaatttatcgccgtgaca
ggggtatctggctcaggaaagtcaaccctagtcaacagtatccttaaaaaaggcattgct
cagaaactcaatcgcaattctgccaaacctggtaaacataagaccattgaaggaattgaa
catattgatcgtttgattgatattgaccagagtccgattggacgaacaccgcggtcaaat
ccggctacctatactggtgtttttgatgatattcgtgacctctttgcgcagaccaatgag
gccaaggtccgtggttacaagaaaggtcggttctcctttaacgttaaaggtggccgttgc
gaggcctgttcaggtgatggcatcatcaagattgagatgcatttcttgccagatgtcttt
gtcccttgcgaggtctgccacggtcgccgttacaatagtgagaccttggaagttcattat
aaagaaaaaaatatctcagaagttctggatatgactgttaacgatgctgttgagttcttc
cggcatattcccaagattgctcgaaaacttcagacgattcaagatgttgggctgggctat
gtcagtctcggtcagccagcgacaaccctctcagggggagaggctcagcggatgaaactg
gccagcgagcttcacaagcgctcaacgggcaagtctttctatatcctagatgagccgaca
actgggcttcacactgaggacatctctcgcctcctcaaggtgctagagcgctttgttgat
gatggcaatacggttcttgttattgaacataatctggatgtcatcaagacagctgatcat
atcattgacttaggtcctgaaggcggtgtcggaggtggtcagatcattgccaccggtaca
ccagaagaggtagctgctaatccagccagccatacaggccattatttgaaagcgaagctg
taa
DBGET
integrated database retrieval system
