Streptococcus merionis: SAMEA4412692_1731
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Entry
SAMEA4412692_1731 CDS
T07119
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smen
Streptococcus merionis
Pathway
smen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4412692_1731 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smen03019
]
SAMEA4412692_1731 (pnp)
03016 Transfer RNA biogenesis [BR:
smen03016
]
SAMEA4412692_1731 (pnp)
Enzymes [BR:
smen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SAMEA4412692_1731 (pnp)
Messenger RNA biogenesis [BR:
smen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAMEA4412692_1731 (pnp)
Transfer RNA biogenesis [BR:
smen03016
]
Prokaryotic type
tRNA degradation factors
SAMEA4412692_1731 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
BAG6
Motif
Other DBs
NCBI-ProteinID:
SNU90084
UniProt:
A0A239SZE1
LinkDB
All DBs
Position
1:complement(1847040..1849298)
Genome browser
AA seq
752 aa
AA seq
DB search
MTKQVFEMTFAGRPLIVEVGQVARQANGAVVVRYGDSTVLTAAVMSKKMSTGDFFPLQVN
YEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDG
DASAPMAAMFGSSLALCISDIPFDGPIAGVQVGYVDGELVINPTEAQQEASLLELTVAGN
KDAINMVESGAKELSEEIMLEALLLGHAEIQKLLDFQNEIVAAVGKEKAEVELLQVDADL
QAEIVANYNSELQAAVQIEEKLAREDATNAVRERVIADYEERYAEHEEHDRIMRDVNEIL
ELMEHAEVRRLITEDKVRPDGRRVDEIRPLAAEVDFLPNVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLGDEYKKRFLHHYNFPQYSVGSTGRYGAPGRREIGHGALGERALEQVLPS
FEEFPYAIRLVAEVLESNGSSSQASITAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKISGITPEILTEALAQAKKARFEILDVI
EATIPEVRPELAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDRDVIEKAKEIIQNLVRDAKVGEVFEGAKVVRIEKFGAFVNLFEKTDALVHISEMAW
ARTNRVEDLVEIGDEVDVKIIKIDDKGRIDASMKVLLPKPEGYVEPERHSREHNGHKRSA
HSNGQSNHQNRRPRQDDNSFGGLKFHEVKRDQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaagtgtttgagatgacttttgccggtcgtcctttaatcgttgaagtgggg
caagtggctcgccaagcaaatggtgctgtggtggtgcgttacggagattcgactgttctt
acagcggcggtcatgtccaagaaaatgtccacaggagactttttcccacttcaggttaac
tatgaagaaaaaatgtatgcggctgggaagttccctggtggctggatgaaacgtgaaggg
cgtccgtcaacggatgcgaccttgacagcgcgcttgattgaccggccaatccgtcctatg
tttgctgaaggattccgcaatgaagtacaggtgatcaacaccgtgctttcctatgacggc
gatgcctctgcgccgatggctgcgatgtttggatcatccttggcgctttgtatttcagat
attccatttgacgggccgattgctggtgttcaggtggggtatgtggatggtgaattagtc
atcaacccgacagaagctcaacaagaagcttctctcttagaattgacagtggctggtaac
aaagatgcgatcaacatggtggagtctggcgccaaagaattgtcagaagaaatcatgctg
gaagctctgctattgggccatgccgaaatccaaaaactcttggatttccaaaatgaaatc
gtagcagcagtcggtaaagaaaaggctgaggttgagttgcttcaggtggatgcagacttg
caggctgagattgtcgcaaactacaacagtgagcttcaagcggctgttcaaatcgaagaa
aaattagctcgcgaagatgcgactaatgcagtgcgtgagcgtgtgattgctgattacgag
gaacgttatgcggaacatgaagagcatgaccgcatcatgcgtgatgtcaacgaaatctta
gaattgatggagcacgccgaagtgcgtcgtctcatcacggaggacaaggttcgtcctgat
gggcgccgtgtggacgagatccgtcctttggctgcggaagtggacttcttgccaaatgta
cacggttcaggtctctttactaggggtcagacgcaggccttgtctgttttgactttggca
ccaatgggagagactcagatcatcgatggccttggtgatgagtataaaaaacgtttcttg
caccattacaatttcccacaatattcggtcggctcaaccggtcgttacggagcgccggga
cgtcgtgagattgggcatggtgcgcttggtgagcgtgcgcttgagcaggtcttgccaagt
tttgaagagtttccgtatgcgattcgtctggtagcagaagtccttgaatccaacggatcg
tcctcgcaagcttcgatcacagcaggtactctggctctcatggctggcggtgtgccgatt
aaggcgcctgtcgcaggaattgctatgggcttgatttcagatggaaataactatacagtc
ttgaccgatatccaaggtcttgaggatcattttggtgatatggacttcaaggtagcaggt
acgcgcgaggggatcacagcccttcagatggatatcaagatttcagggattacaccagag
attttgacggaagctttggcacaagctaagaaagcacgttttgaaatccttgatgtgatt
gaagcgaccattccagaagttcgtccagaattggctcctactgcaccgaaaattgataca
atcaagattgatgtggacaagattaaggttgttatcggtaagggtggcgaaaccattgac
aagattattgcagaaacaggcgtgaagatcgatattgacgaagaaggcaatgtctctatc
tactcaagcgaccgtgatgtgattgagaaagctaaagagatcattcaaaacttagtgcgc
gatgccaaggtcggtgaagtctttgagggagctaaggtcgtgcgcatcgaaaaattcggc
gcctttgtcaatctttttgagaagacagatgccttggttcacatctctgaaatggcttgg
gcacgtacaaatcgtgtcgaagatttggttgaaatcggtgacgaagtcgatgtaaaaatc
atcaagattgatgataaggggcgtattgatgcttctatgaaagttctgcttccaaagcca
gaaggctatgttgaaccagaacgtcattcacgtgaacacaatggtcacaaacgaagcgcg
catagcaacggtcagagcaatcaccaaaaccgcagaccacgtcaagatgacaacagtttc
ggcggtctcaagtttcatgaggtcaaacgcgatcaataa
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