Silurus meridionalis (southern catfish): 124375265
Help
Entry
124375265 CDS
T08004
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124375265 (wdtc1)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124375265 (wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
DSE1_N
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_TEP1_C
TPR_19
Beta-prop_SPT8
PAC11
Beta-prop_WDR35_TULP_N
TPR_BSK1_C
ASA1
Beta-prop_RIG_2nd
TPR_2
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
ANAPC3
Beta-prop_VPS8
TRM82_WD
TPR_1
Beta-prop_IFT140_1st
TPR_17
TPR_16
RMD1-3
CFAP251_N
Barstar
CFAP70_TPR_C
TPR_6
TPR_9
Motif
Other DBs
NCBI-GeneID:
124375265
NCBI-ProteinID:
XP_046689349
LinkDB
All DBs
Position
21:complement(18742816..18753216)
Genome browser
AA seq
665 aa
AA seq
DB search
MSQRNISADLLNRQIRENTALSFQRHYHVTDPFIKRLGLEAELQGHSGCVNCLEWNEKGD
VLASGSDDQHVMVWDPFRHRKLMSMHTGHAANIFSVKFLPHSGDRILVTGAADTKVHVHD
VSVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGFIRQYDLRESSKRSDVLIDLTEY
CGQLVEAKCLAVNPRDNNYLAVGANGPFVRLYDIRMIHNHRKSLSQSAGVHTFCDKQKPI
PDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFKQR
PYTFLLPKKCHSSSEVQNGKTTNGVSNGLHLPANCLKLASNKPCSELPPHLEHIKQQAND
AFARQQWTQAIQLYSLGIHTAGQSNAMLYGNRAAAYMKRKWDGDHYDALRDCLKALSLNP
AHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACSALDKDIKAALFSKNDSA
DEKKGGSSFRFHNFSRKESIPEDEIILRERSFDYKHRYCGHCNTTTDIKEANFFGSKGQY
IVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSSCFLATSGIDPVVRLWSPRPE
TDTENGRVVEDMDGASQANQRRMNADPLEVMLLNMGYRITGLSGSHDASDEDDDNTEGQV
QCRTS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaggaacatcagtgccgacttactgaacagacagatcagggagaacacggct
ctgagttttcagagacactaccatgtgactgacccatttataaaacgacttggcctggag
gcggagctacagggtcactcagggtgtgtgaactgtctggaatggaacgagaaaggagat
gtgttagcttcaggttctgatgatcagcatgtgatggtgtgggatccctttagacacagg
aagttgatgagcatgcacacaggccatgctgcaaacatcttctctgtcaagttcctgcct
cactctggagatcggatcctggtgaccggagctgcagataccaaggtccatgttcacgac
gtgtcggtgaaggagaccatccacatgttctctgatcacacaaacagagtgaagcgcatt
gctactgcccccatgtggccaaacaccttctggagcgcagcagaggatgggttcatcagg
cagtatgatctgagagagagcagtaaacgctcggacgtgttaatagatctgacggaatac
tgcggtcagctggtggaggccaagtgtctcgctgtgaacccgcgagataataactacctc
gccgtgggtgctaacggcccattcgtacgcctttacgacatccgcatgatacacaaccac
aggaagtctctgagtcagagtgcaggagttcacacgttctgtgacaaacagaagcccatc
cctgatggagcaggacagtactacgtcgcaggtcacctcccagtgaaactaccggattat
aataacaggctgcgtgtgctggtggccacctacgtgacctttagtcctgatgggacagag
ctgctggtgaatatgggcggagagcaggtgtatctgtttgatctgacgttcaagcagaga
ccatacaccttcctgctgcccaagaagtgccattcctcatcagaggtgcagaatgggaaa
accacaaacggagtgtctaatggactccatcttcctgccaactgcctgaaactggcgagt
aataaaccctgcagtgagctgcccccccatctggagcacattaagcagcaggctaacgat
gcgtttgcgcgtcaacagtggactcaggccatccagctgtacagtttggggattcacaca
gcgggacagagcaacgccatgctgtacgggaaccgtgccgctgcctacatgaagcgcaaa
tgggatggggatcattacgacgctctgcgtgactgtctgaaggctctgtctcttaacccg
gctcacctgaaggctcacttccgtctggctcgttgtctgtttgagctgaagtacgtagca
gaggctcttgagtgtctggatgactttaaagggaaatttccagagcaggcccacagcagt
gcctgcagtgcccttgacaaggacatcaaagctgctctgttctccaaaaacgactcggca
gatgagaagaaagggggcagctcgttccgcttccacaacttcagccgtaaagagtcgatc
cctgaggacgagatcatcctgagagagcgcagcttcgactacaaacaccgatactgcggc
cactgcaacaccaccactgacatcaaagaggccaacttcttcggcagtaaagggcagtac
attgtgagtgggtcagatgatggctcgttttttatctgggagaaggaaaccaccaacctg
gtgcgagtactgcagggagatgagtctattgtcaactgcctccagccgcatcctagctcc
tgtttcctggcaaccagtggcatcgacccggtggtgcggctctggagcccccgacccgag
acggacactgagaacggtcgtgtggtggaggatatggacggagcgtctcaggccaatcag
aggaggatgaatgctgatcctctggaggtgatgttgttgaacatggggtatcgtatcaca
gggctgagcggaagccatgatgcctctgatgaggacgacgacaacacagaggggcaggtg
cagtgtcgcaccagctag
DBGET
integrated database retrieval system
