KEGG   Silurus meridionalis (southern catfish): 124375309
Entry
124375309         CDS       T08004                                 
Symbol
cldn12
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-12
  KO
K06087  claudin
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03272  Virion - Hepatitis viruses
smeo04382  Cornified envelope formation
smeo04514  Cell adhesion molecules
smeo04530  Tight junction
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    124375309 (cldn12)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124375309 (cldn12)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124375309 (cldn12)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    124375309 (cldn12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:smeo03037]
    124375309 (cldn12)
   04147 Exosome [BR:smeo04147]
    124375309 (cldn12)
   04515 Cell adhesion molecules [BR:smeo04515]
    124375309 (cldn12)
Cilium and associated proteins [BR:smeo03037]
 Other cilia and associated proteins
  Stereociliary proteins
   124375309 (cldn12)
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   124375309 (cldn12)
  Exosomal proteins of colorectal cancer cells
   124375309 (cldn12)
Cell adhesion molecules [BR:smeo04515]
 Immunoglobulin superfamily
  L1 family
   124375309 (cldn12)
SSDB
Motif
Pfam: PMP22_Claudin
Other DBs
NCBI-GeneID: 124375309
NCBI-ProteinID: XP_046689451
LinkDB
Position
21:14287243..14291681
AA seq 364 aa
MSCRDIHATNAFAFVIALLSVGGLAIATVIPQWRTTRLLTFNLNAKNITVYDGLWTKCVQ
RDGSSGCYYFDAEWYSKVDQLDLRLLQFCLPAGLFFSGLALLISLTGMCKTACCSKSPDD
IKSSSCLVNSSGCHLVAGMFFFLGGAIAMPPSVWFLFHTQVLNSRYANIFSTEFAAYVAI
GSAGGLEFAALLMFMWYCMCKKLPSPFWLPLHETADMSTSVSAQPLMANSLPSPATYAPR
SFPPGVLDAPAFVQAPGYTQPMPGPPVPPQVYMSQMSMPDAYGPEAGASQAYGYAFAKLC
PSQSYAPSQSYAPSQSYAPSQSYAPSQSYAPSVSIAPSQRYAGHRYSSRSRHSGIEIDIP
LLTE
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgtcttgccgtgacatccacgctacgaacgcatttgcattcgtcattgccctgctctcg
gtgggcggattagccattgctacggtcatccctcaatggaggacgacacgcttgctcacc
tttaacctcaacgccaagaatattacagtgtacgacggactgtggaccaaatgtgttcaa
cgagacggatctagcgggtgttactactttgatgcagagtggtattccaaagtagaccag
ctggatctaaggctgctccagttctgtttaccagcaggtctattcttttctggcctggcc
ctgctgatcagtctcacaggcatgtgtaagactgcatgctgctccaaatccccagatgac
ataaagtccagcagctgcctagtgaacagctcaggctgccacctggtggcaggaatgttc
ttcttcctaggaggtgctattgccatgccaccatctgtctggttcctgttccacacacag
gtgttgaactcacgctacgcaaacattttctctacagagtttgcagcgtacgtggctatc
ggtagcgccggtggcctcgagtttgccgctttgctgatgttcatgtggtactgcatgtgc
aaaaagctgccctcacccttctggctgcccctgcatgagacagccgacatgagcaccagt
gtttctgctcaacctctaatggcaaacagcctgccatcacctgcaacctacgctcctcgg
agcttccctcctggtgtactagatgctccggcttttgtgcaagccccgggctatacacag
cccatgccaggcccacctgtaccccctcaggtttacatgtcacagatgtctatgcccgat
gcatacgggcctgaagctggtgcctcacaggcttacggctatgccttcgcaaagctatgc
ccctcgcaaagctatgccccctcgcaaagctatgccccctcgcaaagctacgccccctca
caaagctatgccccctcacaaagctacgctccctctgtaagcattgcaccttctcagagg
tatgctggacatcgctactcctcacgatcacgtcactcaggaattgagatcgacattccc
ctcctgacagagtga

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