Silurus meridionalis (southern catfish): 124375322
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Entry
124375322 CDS
T08004
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124375322 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124375322 (stau2)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124375322 (stau2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124375322 (stau2)
mRNA cycle factors
Stress granule specific factors
124375322 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
124375322
NCBI-ProteinID:
XP_046689482
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All DBs
Position
21:complement(4960687..5050614)
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AA seq
632 aa
AA seq
DB search
MAQVKVQTSAHAVPSINGTLPTVLPAPPQDNMANPKEKTPMCLVNELARFNRIQPQYKLL
NERGPAHAKIFTVQLCLGEQVWEAEGSSIKKAQHSTASKALTESLLPRPPPRIMKPDTHT
NPGSITPTVELNGLAMKRGEPAVYRPLEPKPLHNYRANYNFRGIFNQRYHYPVPKVFYVQ
LTVGSNEFIGEGRTRQAARHNAAMKALQALRNEPIPEKLPQSLEEKKSSEEESDANKSEI
SLVYEIALKRNMPVNFEVLKESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAAFSIL
QELKKLPFIPVVEKPKVHYKKRPKTILKVSSQAGPEYGQGVNPISRLAQIQQAKREKEPE
YTLLSERGLPRRREFIMQVKVGDEVTSGTGSNKKVAKRTAAEAMLLHLGYKASTPIQNTQ
EKAHMDNKSWNGQRATFPEATSNTQKGILHLSPDVYQEMEASRNKAGVAPSVTPMTPVTS
VTYMNPKEVSQAPFYNTTVSKTAAIARELLSKTPKTPIIPCSSVQPSQQLEYLAHIQGFQ
VQYTDRQTDTEFVTYLTLSPVQMTFHGIGSSIQASHDQAALSALKQLSEQGLDPVDGGVK
VENGSCEIPMKHPDAKQSNSGSQDCADPNAVA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacctcagcacacgccgtgccttctatcaacggcactctg
cccaccgtcctaccagctcctccccaggataacatggcaaaccctaaagagaaaacaccg
atgtgtctggtgaatgaattagctcgtttcaaccggatccagccgcagtacaaactgctg
aacgagcgggggcctgcacatgccaagatcttcactgtacagttatgtttaggtgagcag
gtttgggaagctgaaggctccagcattaagaaggctcagcattcaacagccagtaaagct
ctgacagagagcttgctgccccgccccccaccacgcatcatgaaaccagacacacacacc
aatccaggcagcatcactcccaccgtggagctgaatggattggcgatgaagcgaggagaa
ccggctgtctacagaccactggaacccaaacccctccacaactatagggccaattacaac
tttagaggaatattcaatcagaggtatcactatccagtccccaaggtgttctacgtgcag
ctgactgtcggcagtaacgagtttattggcgaaggtcgaactcgccaagcggctcggcac
aacgcggccatgaaagcattgcaggcactgaggaacgaacccataccagaaaagctacca
cagagtttggaggagaagaaaagttcggaggaggagagcgatgcaaataaatccgaaatc
agcctggtgtatgagattgcactgaagaggaacatgcctgtgaattttgaggtactaaag
gagagcggcccgccgcacatgaagagcttcctgacccgcgtgacggtgggcgagttctcg
gctgagggtgagggcaacagcaagaagctctcgaagaagcgtgccgctttttccatcctg
caagagctgaagaagctgcccttcatccctgtggtggagaagcccaaagtgcattataag
aaacggccaaagaccatactcaaggtctcctcacaggcagggccggagtacggtcaaggc
gtgaaccccatcagccgactcgcacagatccagcaggctaaacgagagaaagagcccgag
tacacactgctctccgagaggggcctgccacgccgccgagagttcatcatgcaggtgaag
gtgggtgatgaagtgacctcaggaacagggtcgaataaaaaagttgctaaacgtacagct
gcagaggcgatgctgctccatctgggctacaaagcatccacgcctattcagaacacacag
gagaaggcacacatggacaacaaaagctggaatggacaacgggccactttccctgaagcc
acctctaacacgcagaaaggaatcctccacctctcgcccgacgtctaccaggagatggag
gccagcaggaataaagctggcgtcgccccctccgtcacccctatgacccccgtgacctct
gtgacctacatgaacccgaaagaagtgagccaggcaccgttttacaacactaccgtctcc
aagacagccgccatcgcacgggagctgctgagcaaaacgccaaaaacacctataatcccc
tgcagctctgttcagccatcacagcagctcgagtacctcgctcatattcagggcttccag
gtgcaatatacggacagacagacagacacggagtttgtgacgtatctcactctctcccct
gttcagatgacgttccacggcattgggagttccatacaggccagccatgaccaggcggct
ctgagtgccttgaagcagctttcagaacagggactcgacccggtggatggaggggtcaag
gtggagaatggctcctgtgaaataccaatgaagcatccagacgcgaaacagtctaactca
ggctctcaggactgcgcagatccgaacgctgtcgcgtag
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