Silurus meridionalis (southern catfish): 124375328
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Entry
124375328 CDS
T08004
Symbol
gli3
Name
(RefSeq) transcriptional activator GLI3 isoform X1
KO
K06230
zinc finger protein GLI3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124375328 (gli3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124375328 (gli3)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
124375328 (gli3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
GRP
Motif
Other DBs
NCBI-GeneID:
124375328
NCBI-ProteinID:
XP_046689488
LinkDB
All DBs
Position
21:complement(9308190..9491216)
Genome browser
AA seq
1583 aa
AA seq
DB search
METQSQASSTAEKKKRVETIMATKRFSQNRTEISEKDVTSSTTSKEDSNSCSPYHRERRN
VIGGQLPVPGQSSVAAKLSDEPSTSTEMRPLLVKKELHTSLPYPEHTLPYRGTLFAMDPQ
NSYLDPHYTPTQFFPGFHPPVPVDERHTQGRYIYEPSSLSPLHVPPVLAGSPAFSDISVI
RIPAHRNSLGIGVDSSFSPQHPYINPYMDYIRSIHSSPSLSMISAARGLSPVDAPHPGLT
TAEYYHQMALLAGHCSPYADIIPSTMSTTGAGTSALPMEYLQALEGTRFPSPRFLARQSR
KRPLPGSPHLDSSLDFHTMIRKSPNSLMSILNSSRPSSSTSGSYGHLSAGTISPALSFAY
PPTPVALQMHQQLIGRSPGIVGSTFGHSPPLIHTGPSCTTQRPIASITPSATGLTECSAS
STDLQNKPTSESAVTSTGDLMHHKRSKLKPVDEPSSPGAVSVQDYPDGMTLVKEEEDKED
GKQEPEVVYETNCHWENCCREFDTQEQLVHHINNDHIHGEKKEFVCRWEDCSREQKPFKA
QYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSN
ASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDVYPR
PPAHPRERGANGQGRSSKLQRPFEAFPDQREYNHATSTQDECLQVKSIKTEKPMTSQPSP
GSQSSCSSDQSPTSSHLSHGVQFGLVREEVVEDQKFEDEDEEKHTKGEELDSPIMVSTVS
TATATAATLALQPCRSLGQPMRWMEQVKMERLRQVNGGTSRLKYLSPTAPTEGNSLASLT
GKGLCTVRSTCGGASVPQPCLHPEPSSTELTLLSLLQDRRHSSGSTTSSAYLSSSRRSSG
ISPCFSSRRSSQASQSEHRQHRQLNNLSASDSYDPISTDASRRSSEASQYGGGGGNRGVG
GGETGSRGVLNLTPAQHYHLRATYAAATGGPPPTPLPNTEQVSYKIQMNVARDVKDTNKL
ILPSLVRPHASSDGSFYSQISRNRYRQRELYHGESHGKSDRRASDPLRPRGQNILGSSQI
QRFGSQNNIEHLQPLVSKNVVQGDLVKSTNDKNYTNLEGNIHSGQLFPFASSIMEHLAPD
TLAIKHDRTLLFSPADTDPHCTQDRFINSQFHRNNFAQNSEEVYKTKNSLQQHGAHDTQS
LGEDSLPIQWNEVSSGSIDCQLPLAPQRCEQWPNQINAVGLPFGCFENMIVQQQLPSSFT
DQQHPNERERVQQIDELSNVHSDQNQKCKGANSSRMHQGVSVETIQQNCSDKRRNTSTFK
IGQQNCQNAMGPICPISFHQASQSQTQQLHQSLEIPSPTSGNLFQQGIAKSSLSNVFPLQ
AQCAVSSQSVAQDLSQSQHSTQQITSSNNAQSNLSFAKKNTNCSLANPIANQIEIDKLQP
NSCSSIQQQRILEQCFDKAKSSDFRAQHCQMETLKIEPLKDLSPGADQVTSTVESSTDCS
VLHNFGIKFSSILDDSLDQGRLVSDVISRSVLHDLSQTSSWHTSHLSAIIHCLPPGKTNM
AIGDMNSLLTTLAEENRFLAIMQ
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacagtcccaggccagctcaacagcagagaagaaaaaaagggtggagacaatt
atggcaaccaagagattctcccagaaccgaactgagatcagtgagaaggatgtgacttca
agcacaacatccaaagaagatagcaattcttgttctccataccaccgagagcggcgcaat
gtgattggtggacaactaccagtgccaggccagagttctgtagctgctaagctgagtgat
gagccatccacctccacagaaatgcgacctctgttggtaaagaaggagctgcacacctcc
ctgccctaccctgaacacacactcccttatcgggggacactgtttgcaatggaccctcaa
aacagctacttggaccctcactatactccgactcagttcttccctggattccaccctcca
gtgccagtcgatgaaagacacacacagggccgttacatctatgagccctcttcattgtca
ccgctccatgtgcctcctgtactggcaggcagccctgcattttctgatatctctgtcatt
cgaatcccagctcaccggaattccttaggcattggagtggactcatcctttagcccccaa
cacccttacatcaacccctacatggactacattcgctctattcacagcagcccctctctt
tcaatgatctctgcagctaggggactcagtcctgtagatgccccacaccctggtttgacc
actgcagaatactaccatcagatggcactgcttgcaggtcactgtagcccctatgctgac
atcattccctctaccatgtccaccactggagcagggaccagtgctttgccgatggaatac
ctccaggctctggaaggtactcgctttcccagtccgagatttcttgcccgtcagagcagg
aagcgcccccttcctggctcaccacacttagactcaagtttagattttcatacaatgatc
cggaaatcaccaaattccctgatgagcatcctgaatagctcacgtcccagctcttccacc
agtggatcatacggtcatctgtctgctggcactatcagtcctgcattaagttttgcctac
cctcccaccccagtggcactgcaaatgcatcagcagctaattggtcgatctccaggcatt
gtggggtctacttttggccacagtccccctctcatccataccggcccttcctgcactact
cagagacccatagcaagcattaccccctcagcaactgggcttacagagtgctctgccagc
tccactgacttacaaaataaacccactagtgagtcagcagtgactagtacaggagatctt
atgcatcacaaacgctccaaactcaagcctgttgatgagccttccagccctggagcagtt
agtgtgcaggattatccagatggaatgacactggtgaaagaggaggaagataaggaagat
gggaaacaggagccagaggtagtatatgagaccaactgccactgggagaactgctgcaga
gaatttgacacccaggaacagcttgtacatcatataaataatgaccatatccatggagag
aagaaggagtttgtgtgtagatgggaggattgctctcgagaacagaagcccttcaaggcc
cagtacatgctggtggtgcatatgcgcagacacacaggcgagaaaccacacaaatgcacg
tttgagggctgttccaaggcctactctcgactggagaacttgaagacacacttgcgctct
catacaggagagaagccatatgtgtgtgagcatgaaggctgcaacaaagccttctcaaat
gcatcagaccgtgccaaacatcagaatcggacccattctaatgagaaaccctatgtatgc
aagatacctggctgtaccaaacgctacactgaccccagctctttgcgcaaacatgtaaaa
actgttcatggtcctgaagcccatgtcactaagaaacagcgtggagatgtttacccgcga
cctccagcccatcctcgtgaaaggggagccaatggacagggtcgatcatcaaaattacaa
cggccatttgaagcatttcctgaccaaagagagtataaccatgctacctcaacacaagat
gaatgtctgcaagtcaagtcaatcaagacagagaagcccatgacgtctcagccaagccct
ggcagtcagtcttcatgcagcagtgaccagtcccccaccagctcccatctcagccatgga
gtccagtttggccttgtaagagaggaggtggtggaggaccagaagtttgaagatgaggat
gaagagaagcacactaagggagaagagttggattcccccatcatggtctctactgtatcc
actgctacagccacagcagctactctagctctacaaccctgcagaagtctggggcagcct
atgcgttggatggaacaggttaagatggaaaggcttaggcaggtgaatggaggaacatca
aggctgaaatatctgtcacccacagcacccactgaaggcaacagtttggcctcccttaca
gggaaaggcttgtgtactgtcaggagtacttgtgggggtgcatcagtacctcagccttgt
ttacatcccgagccatccagcacagaactgacattgttaagcctccttcaggatcgccgt
cacagcagtggcagtaccaccagctcagcctacctaagcagcagccgccgttcctctggc
atctctccctgcttctcaagccgccgctccagccaagcctcacagtctgagcaccgacag
cacaggcagctgaacaaccttagtgcttctgactcttatgacccaatctctactgatgcc
tcccgtcgctctagtgaggctagccaatatggtggaggtggtggaaatagaggtgtggga
ggaggtgaaacgggatcaagaggtgtgttgaacttaacaccagcacagcattatcatctt
agagctacatatgctgctgcaacaggtgggcccccgccaacacctttacctaacacagaa
caagtaagctataaaattcaaatgaatgtggcaagggatgtgaaagacacaaacaagctc
atattgccatcactagtcagaccacatgccagtagtgatggtagtttttatagccaaatc
agtcgcaatcgatacagacagagggaactatatcatggggaaagccatggcaaaagtgac
agaagagcaagtgatcctctaaggccaagaggccaaaatatccttggaagttcccagata
cagcgttttggcagccagaataacatagaacatttacagcctctggttagtaaaaatgtg
gtccaaggcgatcttgttaaaagtacaaatgacaaaaactacactaacttagagggcaat
atacacagtggccaactcttcccttttgcttctagcatcatggaacatttagcacctgac
actttagctattaaacatgacagaactctcttatttagccctgctgacactgaccctcac
tgcacccaggacagatttataaattcccaatttcacagaaataattttgcacagaatagt
gaagaggtgtataaaaccaagaattctttacagcaacatggggcacatgatacacaaagt
cttggagaggatagcctgccaattcagtggaatgaggtaagctcaggaagtattgattgt
caacttcctctggcgccacagagatgtgaacaatggcccaaccaaattaatgcagtaggg
ctcccatttggttgctttgaaaatatgattgtacaacagcagctcccgtcatcattcaca
gaccagcagcaccctaatgagagggaaagagttcagcaaatagatgaactttccaatgta
cacagtgaccaaaatcagaaatgcaaaggggcaaattcaagcagaatgcaccaaggagtg
tctgtggagactatacaacagaattgcagtgacaaaaggaggaacacaagcacatttaag
attggtcaacaaaactgtcagaatgccatgggccctatctgtccaattagctttcatcaa
gctagtcagtcacaaactcaacagcttcaccagagccttgaaattccaagtccaacaagt
ggaaacctgttccagcaagggatagcaaagtccagtttatccaatgtattccctcttcaa
gctcagtgtgcagtatctagccagtctgtggctcaagacctctctcagtcacaacattcc
acccaacagatcactagtagtaacaatgcacaatccaacctaagctttgcaaaaaaaaat
actaactgctcacttgctaatccaattgctaatcaaatagaaatagataagcttcagcca
aactcatgttcttccatacagcaacagagaatcttggagcagtgctttgataaagcaaaa
tcttcagacttcagagctcaacactgccaaatggaaacacttaaaattgaacccttaaag
gatttgtcccctggtgctgatcaggtgaccagcacagtagaaagcagcacagattgcagt
gttttgcataatttcgggataaaattttcctccattttggatgatagccttgaccaggga
cgtttggtttcagatgttattagtcgtagtgttcttcatgatttatcacagacttcttct
tggcatacttcacacctctcagctataattcattgtttgcctcctggtaaaaccaacatg
gccatcggagacatgaactctctcctgactacccttgcagaagagaacaggtttcttgcc
attatgcagtag
DBGET
integrated database retrieval system
