Silurus meridionalis (southern catfish): 124375399
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Entry
124375399 CDS
T08004
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124375399 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124375399 (prpf4bb)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124375399 (prpf4bb)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
124375399 (prpf4bb)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124375399 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pox_ser-thr_kin
ABC1
CoV_S1_C
CSTF_C
Motif
Other DBs
NCBI-GeneID:
124375399
NCBI-ProteinID:
XP_046689669
LinkDB
All DBs
Position
21:complement(9258010..9272854)
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AA seq
1015 aa
AA seq
DB search
MADVEMDLQSERLNNGKEDLASPLKSGKENSEMSEEDEEEEGTEQAEVNGRNRDETSKHH
SSNKHKKKKHKHRSKHKKHKHALEEDKERKRKHKHKHKKHRRKEKTPTPSGAVHRKAENA
SPSSENPNVDDRALLEDLEKQRAMIKAELDSQLMEGKVQSGMGLILQGYNSGSEEDGEGH
RPRNGEQCQKGNGGKTQPPRDRSNRGSKTKQDSPDNKMSTKLHSLSREGDRVMRESRGSR
LSKSGKEIAEYSRSKDRRSSQSQNRSRERVRKSQSPSSKRRSVEKRTEQKRCSSEGKEAR
TERHPSPREEERRTAQELGRQRSGSPAHLHYQRSQSKDGRSEADKAKRPGKSPSKDASSG
KENRSPRHRLASSPRQGRSSSTHRRERQTHQAASSGSKQNYSPSRNRSPARKGRSRSADR
RRDSPSRKRSRVDGTGRSYETSPARRRVSRSPLRRRSLSPRRQSRPSPRWRSRSPFRRRS
GERDRFGHSRARRSTSRERARRRRRSRDEDKYKGSLSEGMKVDQDSSSEDVIEDFDAEEE
DEEALIEKRRQQRLAIMQKYRTAKDNSNMGLMVSEPSSPQSSTRSRSASPDDILERAAAD
VKEYERENVNTFEDNVKAKLNLIAQEKEGINTKKLSAPDMFTESDDMFAADFDSARLRAV
GVGKDFKENPNLRDNWTDSEGYYRVNIGETLDKRYDVYGYTGQGVFSNVVRARDTARAGQ
EVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSM
NLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKL
CDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGRILFPGS
SNNHMIKLAMDLKGKMPNKMIRKGFFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTINPT
KDLLADLIGGQRLPEEQRKKVMQLKDLLDGTLMLDPAKRISINQALQQSFIQDKI
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgaaatggacttacaaagtgagaggttgaataacggtaaagaagatttg
gcgagtccattaaagagtggaaaagagaacagtgaaatgtctgaagaggatgaggaggag
gagggcacagagcaagctgaggtaaatgggaggaacagagatgaaacttccaaacatcac
agcagcaacaaacacaaaaaaaagaagcacaagcaccgtagcaagcacaaaaagcataaa
catgctttagaggaggataaggagcgcaagcgtaaacacaaacacaagcataagaagcat
cgtcgcaaagagaagacacctaccccttcaggagccgttcaccgaaaggctgaaaatgcc
tctccttcatctgagaacccgaatgtggatgaccgggctctgctagaggatttggagaag
cagagagctatgatcaaagctgagctggatagccagctgatggaaggtaaggttcagtca
ggaatggggcttatcctgcagggctataattcaggctctgaggaggatggagagggacac
aggccccggaatggagagcagtgccaaaaaggcaatgggggtaaaactcaaccaccaagg
gatcgtagcaacaggggtagcaaaaccaaacaggactcaccagataataaaatgagcaca
aagctacatagcctctccagagagggagacagagtgatgagggagagcagaggcagccgt
ctgagtaagagtgggaaagaaatagcagagtacagcaggtccaaagataggaggagctca
cagagccagaaccgatctcgtgagagagtaaggaaatcacaatccccatccagtaagagg
cgctcagtagaaaaaagaacagagcaaaagaggtgctcatctgaagggaaggaggctcga
acagaaagacacccgtctcctcgtgaagaggaaaggaggacagcccaggagctgggaaga
cagcgatcgggttcaccagcacacttgcactatcagaggtcacagtccaaagatggccgc
tcagaggcagacaaggccaagagacccggcaaatcgccttccaaggatgcttcgtcagga
aaggagaaccgctcgccacgccaccggttggcatcgagtccacggcaaggccgtagttct
tccactcatcggagagagcgccagactcatcaagcagcatcatctggatccaaacagaac
tactctccttctaggaacaggtcccctgcaaggaagggccgtagtcgctcagctgatcgc
agaagagactcaccatcaaggaaacgctcgcgtgtagatgggactggaaggtcatatgaa
actagcccagcgcgacgaagggtcagccggtcaccacttagacgaaggtctttgtcccca
aggcgtcagtcgcgcccctcaccacgatggcggagtcgatctccttttagacgaaggtct
ggtgagagggatcgtttcgggcacagcagagctcgtcgctctacgtccagagaacgtgcg
cgcaggaggaggcgcagtcgagatgaggataaatacaaagggagtttgtcagagggcatg
aaggtggatcaggattcctcctcagaagatgtgatagaagattttgatgccgaggaggag
gatgaagaggctctgattgaaaagcgacgacagcagcgactagcgataatgcagaaatac
aggacagcaaaggacaacagtaacatgggcttaatggtgtcggagccaagcagtccccag
agcagcacacgcagtcgctctgcctcaccagatgacatcctggagcgtgctgctgccgat
gttaaggagtacgaacgtgaaaatgtgaacacctttgaggataatgtgaaggccaagctc
aacctcatagctcaggagaaagagggaataaacacaaagaaactgtctgcccctgacatg
tttacagagtcggatgacatgtttgctgcagattttgatagtgccaggctcagggctgtt
ggagttggcaaagactttaaggaaaacccaaatcttagagacaactggaccgactctgaa
ggatactatcgtgtgaacattggtgagacgttagataagcgctacgatgtctatggctac
acagggcagggtgtattcagtaatgttgtccgagccagagacactgcacgtgctggccag
gaggtggcagtgaagatcatccgcaacaacgagctcatgcaaaagacagggctgaaggag
ttggagtttctgaagaagcttaatgatgctgatcctgatgataaattccattgtttgcgc
ctcttcagacatttctaccacaaacagcacttatgtctggtgtttgagccgctaagtatg
aatcttcgtgaggtcttgaagaagtatggcaaagacgtaggtctccacattaaggctgtt
cgttcctacagccaacagctctttctggccttaaagcttctgaagcgctgtaatattcta
catgctgacatcaaacctgacaacatattggtgaatgagtcaaagaccatcctcaaacta
tgtgattttggttcggcctcccacgtggctgataacgacattactccttacctggtcagc
cggttctaccgagctcctgagatcatcattggaaagccatatgattatggaattgatatg
tggtcagtaggttgcactctgtatgagctttatacaggaaggatcttattccctggctct
tcaaacaaccacatgatcaaactggcgatggaccttaaaggaaaaatgcccaacaagatg
attcgaaaaggtttttttaaagatcaacactttgaccagaacctaaactttctgtacata
gaagtggacaaagtgactgaaagggagaaagtgacagtaatgagcactattaaccctact
aaagacctgctggcagacctgattggtggccagagacttccagaagagcagagaaagaaa
gtgatgcagctgaaggatctgcttgatggcactctgatgttggaccctgccaagcgcatc
agtataaaccaagccctgcagcagtcattcattcaggacaagatttga
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