Silurus meridionalis (southern catfish): 124375425
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Entry
124375425 CDS
T08004
Symbol
boc
Name
(RefSeq) brother of CDO
KO
K20020
brother of CDO
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124375425 (boc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124375425 (boc)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
Other
124375425 (boc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_4
Ig_5
BiPBP_C
ArsP_1
Motif
Other DBs
NCBI-GeneID:
124375425
NCBI-ProteinID:
XP_046689717
LinkDB
All DBs
Position
21:complement(2733206..2756564)
Genome browser
AA seq
1028 aa
AA seq
DB search
MPRMEDRIAWHLRVQVLCALCSALLCCLQVSSALSDDDIPVFVEEPQSEVQKLGGSVRLR
CRAQPAQARISWRLNGRELFADGEEAELGVVMQPGVLFIPSLSNGTLGRYQCVARTRVGA
RASMPANVTAAKLRDFEPDDQQEIEVDEGNTAVIECHLPESQPQAQVRYSVKQEWLETSK
GNYLIMPSGNLQIANATQEDEGPYKCAAYNPITQEIKTSSSTDRLRVRRSTSEAAKIIYP
PASRTMAVRKGHGLVLECVASGTPTPQVTWAKDGRELSPKNNTRFLLSNLLIDAVSDGDS
GTYACHAHNGMGSPGTATILYDVQVIEPPQVRVDLQQQEPAWGDTVRFSCQVRGNPAPTV
VWLHNAQPISPSSRHRLSSHMLRVLSVGPQDDGVYQCMAENWVGGAQAATRLLTLPAAPS
RPGRLPLIRPLSPDQVLRELPPARPVAPNTDLFIDCSEIPGNVSPAEAPVILSQPRTGTA
DYYELIWEPRHDGGAPVLEYVVKYRKSGDSLGEWTIKNISGLEHKLILAKLQPASLYEVE
MAARNCAGQGQPAMMTFRTGRKVLGGPIERPKTPVSPSRLSPPEAPDRPTVTTASETSAY
VTWIPRGNRGFPIQCFRVEFKKLRKDGVAGGEWEVAEDNISPSRLSVQIKGLEKGTSYKF
RVLAVNVLGASPPSAPSKAYTVMGSNQTNPRPVDGPYITYSEAINETTIILKWTYTPVNN
TPIYGFFIYYRPTDSDNDSDYKRDVVDGDRYWHAITSLQPETAYDIKMQCFNEGGVSEFG
NVVILETKARPNQKHTTPETSSHRPDLGGSMSRPSDLPYLIVGVVVLGALVFIIVAFIPF
CLWRAWAKQKQTTDMCFPAVAAPLSSCQYTMVPMQGMALVGHCPVDSHLTSGHSVYAPKG
EYMVNGKHHTHHLPGVHQEDADCEMENGKFLPQRLSNGHAHDYHYSMGVPGHVEDDGCCE
PDDSTMELLSHDHPVHVQENPASSCSELSLLAASESVGMTTSVEDVTKKDVFKIQCESQL
EERVLHDG
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaatggaggacagaatagcatggcatctgagggttcaggtgctctgtgctctg
tgttcagctcttctgtgttgtctgcaagtttcttcagctctcagtgacgacgacatccca
gtgtttgttgaggaaccacagtctgaggtgcagaaactgggaggcagtgtgaggctgcga
tgtagagctcaacccgctcaggcccgtatcagctggcgtctgaacgggcgtgagctgttt
gccgacggtgaagaggctgagctgggcgtggtgatgcagccgggcgtgctctttatcccc
tccctttctaacggcacgttggggcgataccagtgtgtggccaggaccagggtcggggca
cgagctagcatgcctgctaacgtcactgcagctaaactgagagactttgagcctgatgac
cagcaggagatcgaggtggatgaagggaacacggcggtgatcgagtgtcacctccctgag
agccagccccaggcgcaggtccgctacagcgttaagcaggagtggctcgaaacatctaaa
gggaattacctcatcatgccatcgggcaacctgcagatcgccaacgccacccaggaggac
gaagggccttacaaatgcgctgcctacaatccaatcactcaggagatcaaaacctcctcc
tctactgaccgcctgcgcgtacgccgttccacatctgaagcagcaaagatcatctaccct
ccggcatcccgcaccatggcggtgcgtaaaggccacgggttggttctggagtgtgtagcg
agtggcaccccgacccctcaggtcacctgggcgaaagacggtcgagagctcagccctaaa
aacaacactcgctttctgctcagcaacttgctgattgacgccgtaagtgacggcgactcg
ggcacctacgcctgccatgcccacaacggcatgggctcccctggcacagcaaccattctc
tacgatgtccaagtgatcgagcctcctcaggtgcgggtggacctgcagcagcaggagcca
gcgtggggcgacaccgtgaggttcagctgtcaggttcggggaaatccggcacccaccgtg
gtttggctccataacgctcaaccaatctcaccatcatcacgtcaccgcctctcctcacac
atgctgcgtgtgctcagtgtgggcccgcaggacgacggagtctaccagtgcatggctgag
aactgggtgggcggagcccaggctgccacgagacttctcactttgcctgctgcaccctca
cggccgggtcgactgcccctcattcgcccgctgagcccagaccaggtgttgcgagagctg
cctcctgctcggcccgtggcacccaacacggaccttttcatcgactgctcagagatccct
ggaaacgtgtcaccggccgaggctccagtcatcctcagccaaccacgcactggcacagcc
gactactacgagctcatctgggagcctcggcatgatggcggggcgcccgtcctggaatac
gttgtgaagtaccgaaagtctggtgactctctcggtgagtggaccataaagaacatatct
ggtttagagcacaagctgattctggccaaactgcagccggccagcttgtatgaagtcgag
atggcagcgaggaactgtgctggacagggccagcctgctatgatgaccttcagaactgga
cgaaaggttttaggcggaccaatagagcgacccaaaacaccagtgtcaccgtcacgtctg
tctccccctgaagctccagacaggccgacagtaaccacagcatctgagacttcagcttac
gtgacgtggattccccgtgggaaccggggctttcccattcagtgctttcgagtggagttt
aaaaaattgaggaaggatggagtagccggtggggagtgggaggtagcggaggacaacatc
tctccatcacgcctctctgtacagatcaaaggcctagagaaaggcacctcatataaattc
cgggtattggcagtgaacgtgttgggagcgagtcctccaagtgccccatccaaagcttac
acagtgatgggaagcaatcagaccaacccccggcctgtcgatggcccgtacatcacctac
tctgaagcaatcaatgagaccaccatcatcctcaagtggacttacacaccggtgaataac
accccgatatatggcttcttcatctattaccgacccaccgacagtgataatgacagcgac
tataagagagatgttgtggacggagatcgatactggcacgccattaccagccttcagccc
gaaaccgcgtacgacattaagatgcagtgttttaacgaggggggtgtgagcgagtttggc
aatgtggtcatcctagaaacgaaagctcgacccaatcagaagcacacgactccagagacc
tcgtcgcaccggccagacttgggaggctctatgtcacgccccagtgatttaccgtacctc
atagtgggagtggtggtgcttggagcccttgttttcatcattgtagcctttattccattt
tgtctgtggagagcctgggccaagcagaagcaaacgacagacatgtgctttccagctgtg
gctgcacctctgtcgtcctgccagtacaccatggtgccgatgcagggcatggctttagta
gggcactgccctgtagactcccacctgacctccggccattctgtgtacgcacccaaagga
gagtacatggtcaacgggaaacatcacacacaccaccttcctggagtacaccaggaggat
gcagattgtgaaatggaaaatggcaaatttttgcctcaaagactttctaatggacatgcc
catgattatcactactccatgggtgttcctggtcatgtagaagacgatggctgctgtgaa
ccagacgactctaccatggagctcctgagccacgatcaccctgtacacgtgcaggagaac
cctgctagctcatgttcagaattgtcactgttagctgcatcagagtctgttggcatgacg
acatcagttgaagacgtgacaaaaaaggacgttttcaagatccagtgtgaaagccagcta
gaggagcgagtactacatgacggatga
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integrated database retrieval system