Silurus meridionalis (southern catfish): 124375487
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Entry
124375487 CDS
T08004
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124375487 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124375487 (trip13)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
124375487 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
nSTAND3
AAA_22
AAA_18
AAA_14
AAA_25
TIP49
AAA_24
Viral_helicase1
ATPase_2
NACHT
AAA_5
NPHP3_N
AAA_28
TsaE
RNA_helicase
bpMoxR
RuvB_N
AAA_33
AAA_17
ABC_tran
Cytidylate_kin
AAA_7
AAA_11
AAA_30
IstB_IS21
DUF815
Rad17
SLFN-g3_helicase
AAA_19
Mg_chelatase
NB-ARC
PduV-EutP
nSTAND1
nSTAND6
AAA_3
RsgA_GTPase
Sigma54_activat
NTPase_1
SPC25
Motif
Other DBs
NCBI-GeneID:
124375487
NCBI-ProteinID:
XP_046689834
LinkDB
All DBs
Position
21:complement(14602811..14610310)
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AA seq
429 aa
AA seq
DB search
MNAEKMEVSQNSHQPPCEDKTEVHIEVQVKSQSTARRTEVRTHVMALLERHSLVMGSFKW
TDFDDDFLTQNVQSVAIVDVEEQAPLDLKMSQLCIHIFSLNDDGPSTLNLDEEEALSAAN
HWLLPAAEFHGIWESLVYEEGIKTQLLDYVLTANLFSDKNIDSNLVAWNRVVLLHGPPGT
GKTSLCKALAQKLSIRLSERYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQELIDEK
EALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTE
KIDLAFVDRADIKQYIGLPSAQAIFNIYLSCLEELMKRQIIYPRQQLLNLEELHTLDYIE
SEVTELSLHLQRIAEKSVGLSGRTLRKIPFLAHALYAKTTVMTVERFLCAMDKAVAHQMR
EREKLVNSV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggagaaaatggaggtcagtcagaattcccatcagcctccctgtgaggacaaa
accgaagttcacatcgaagttcaggtcaaatctcagagcacggctcgacggactgaagta
aggacgcatgttatggcactgctcgagcgacacagcctcgtcatgggctccttcaagtgg
actgattttgacgacgactttctgactcaaaatgttcagtctgtcgccatagtggatgtc
gaagaacaggcacctctcgatttgaagatgagccaactgtgcattcacatcttctctctc
aacgatgacggacctagcaccctcaaccttgatgaagaggaggcgctatctgcagccaat
cactggctcctgccagctgctgagttccatgggatctgggagagcctggtttatgaggaa
ggaatcaaaacacaactcttggattatgttttgacagcaaatctcttctctgacaaaaac
attgacagcaatctggttgcctggaatcgtgttgtgttgcttcacggacctccgggcacg
gggaagacgtctctgtgcaaagcgctggcacagaaactctccatcagactctcagaaaga
tattcatacgggcaattcgtagaaatcaacagccacagtttattctcgaaatggttttca
gagagcggaaaacttgtcacaaagatgtttcagaagatccaagagctaatagatgagaaa
gaagcccttgtttttgtccttattgatgaggtggagagtctaacagcagcaagaaacgct
tctcaggctgggaccgaaccttcagatgcaatccgagtggtcaactctgttcttacacag
ctggaccagattaaacgacatccgaacgtagtgatcctcaccacctcaaacgtaacggag
aagatagacctggcgtttgtggacagagcagatataaagcagtatattggcctgccaagt
gcccaagccatctttaacatttacttgtcgtgtttggaggagctcatgaagcggcaaatc
atttacccacggcagcagctgctgaaccttgaagagcttcatacattggattatattgag
agcgaagtgaccgagctcagtctgcatctgcagagaattgcagagaagagcgtgggccta
agtgggcgcactttacggaaaattccctttttggctcatgcgctttacgcaaagactact
gtgatgacagtcgagcgatttctttgcgccatggataaagctgtggctcatcagatgagg
gaacgggagaagctggttaacagtgtatga
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