Silurus meridionalis (southern catfish): 124375588
Help
Entry
124375588 CDS
T08004
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124375588 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124375588 (washc5)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Others
WASH complex
124375588 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RSF
DUF3106
Motif
Other DBs
NCBI-GeneID:
124375588
NCBI-ProteinID:
XP_046690027
LinkDB
All DBs
Position
21:14239146..14255994
Genome browser
AA seq
1159 aa
AA seq
DB search
MDFLAENNLCGQAILRIVSRGNAIIAELLRLSDFIPAVFRLRDKSDQQKYGDIICDFSYF
KGPEYYESKLEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYVVDLIRYLDDLNEGVY
IQQTLESVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSVDS
NLDDICKLLRSTGYSSNPGAKRPNNYPESYFQRVPISSTFISMVIGRLRSDDIYNQVSAY
PLPEHRSTALATQAAMLYVCLYFCPSILHTQQAKMRETVDKYFPDNWVISIYMGISVNLV
EAWEPYKAAKTALNYTLDTANIKEQASRYASSVESLRQQVQQLLKEGFLREEIVLDNIPK
LLNCLRDCNVTIRWLMLHTAESAYDSNNKRLRQIKDQVINDSKYNPKILFQLLLDTAQFE
FRLKEMFRQMLAEKQLKWESYKKEGSERMIELAEVFSGVKPLTRVEKNENLQAWFREISK
QVESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINIK
EEVLITMQIVGDLSYAWQLIDSFTSIMQESIRANPSMVTKLRATFLKLASALDLPLMRIN
QANTSDLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDKL
KDYAQLGARYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAYS
LHKGLIFNPKAKPSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINYN
VEQECNSFLRTKIQDWQSIYQSAHIPIPKYPPVDESATFIGRLCREILRITDPKATCYID
QMNTWYDMKTHQEVTSNRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQMFLTVLQRIILK
DKAVVDIFKGLLNVVNPVKGIVATASKVYANAVAKTQKIWPGYLESIMKVGQMQILRLQI
ANELNYSCKFDSKHLGAALENLNNSLLADIEAHYQDPSLPYPKEDNTLLYEFTAYLEAAG
IHNPLNKIYITTKRLPYFPTVNFLFLIAQLPKLQYTKNQGMTCRRAADPVDWVPLVLGLL
TLLKQFHSRYTEQFLALIGQFIRSIMEQCTSQKIPDMPADVVGALMFLEDYVRYTKLSRK
VVEAHIPSFIFDEFRTVLQ
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggacttccttgcggagaataacctgtgtggccaggccatcctgaggatcgtgtcccgt
ggaaacgccatcatcgccgagctgcttcgtctctccgacttcatccccgctgtgttcagg
ctcagagacaagagcgaccagcagaaatatggtgacatcatctgcgacttcagctatttt
aagggtccagagtactacgagagcaagctggaggccaagccagaacttcaggacttggac
gaggagttccgggaaaacaacattgaaatattgtctcgcttttatctggcctttgaaagt
gtccataaatacgttgtggacttaataaggtacctggatgaccttaatgaaggtgtctac
attcagcagactctggaatcagtccttcttaatgaagatggaaaacagctattgtgtgaa
gctttgtatctgtacggcgtcatgctgttggttatcgatcagaaaatcgaaggagaagtc
agagagaggatgctggtgtcctattatagatacagtgctgctcgatcctcagtagactca
aacctagatgatatctgtaaactgttaagaagcaccggttactccagtaaccccggggct
aaacggccaaacaactaccccgaaagctacttccaaagagttcccatcagctcgacattc
atcagtatggtcataggtcgcctgcggtccgacgacatctacaaccaggtttctgcttat
ccgctgccagaacaccggagcactgcactggcaacccaagcggccatgctgtacgtctgc
ctgtacttctgtccctccatcttacacacacagcaggccaagatgagggagactgtggac
aaatactttcctgacaactgggtgatcagtatatacatgggcatctctgtgaacttagtg
gaagcgtgggagccatataaagcagccaagactgcactgaactacaccctggacacagca
aatatcaaagagcaggcttctcgctatgcctccagtgtggagagcctccggcagcaggtg
cagcagttgctgaaggagggcttcctgagagaggagatcgtcctggacaacatcccgaaa
ctactgaactgcctgcgggactgcaacgtaaccatccgctggctgatgctgcacactgca
gagtcagcatatgattcgaacaacaagcgtctacgccaaatcaaggatcaagtgatcaac
gattccaaatacaaccctaagattctgtttcagctgcttctcgacacggctcagttcgag
tttagactcaaagaaatgttcaggcagatgttggctgaaaagcagctgaaatgggaaagc
tataagaaagagggatcggagaggatgatcgaactggccgaggtgttttctggagtcaag
cctctcaccagggtggagaaaaacgaaaacctgcaggcgtggttcagagagatctccaaa
caggtcgagtctctgaactatgaagactccaccgcagctgggaggaagacggtgcagcta
attcaggctttagtagaagtccaagagttccaccagctggagtctaacctgcaggtgtgc
cagtttctggcggacacgcgcaaattcctgcaccagatgatccgtacgatcaacattaaa
gaagaggtgctgatcactatgcagatcgtaggggatttgtcctatgcctggcaacttata
gacagtttcacctctatcatgcaggagagtatccgagccaatccgtccatggtcaccaaa
ctccgagcaacgttcctgaagttggcctcggcgctggatcttcccttgatgcgcattaat
caggccaacacttctgatctgctcagcgtgtcgcagttctactccggagagctggtggcc
tacgtcagaaaggttttgcagatcattccagaaagcatgttcacctcactggccaaaatc
atcaagctgcaaattcatgacatcatggaggttcctacaaggctggacaaagacaagctg
aaggactacgcccagctcggggcccgctacgaggttgccaaactcactcatgccatttcc
atcttcactgaaggcattctgatgatgaaaacgacacttgttggaatcattaaggtggat
cccaagcagcttctagaggatggaataaggaaggagcttgtaaaacgagttgcttattca
ctacacaaaggccttatatttaaccctaaagctaaacctagtgagctaatgcccaagctg
aaggaaatggctgccacaatggatggcttttatcgctccttcgagtacattcaggactac
gtaagcatctatggcctaaagatctggcaggaagaggtttcccgaatcatcaactacaac
gtggagcaggagtgcaacagtttcctcaggaccaagatccaagattggcagagcatctac
caatcggcacacattcccattcccaaataccctccagtggacgagtcggccacgttcatc
ggccgtctctgcagggagatcttaaggatcactgatccgaaagcaacttgctatatagat
cagatgaacacctggtatgacatgaagacacaccaggaagtgaccagcaacaggctgttc
tcagagatccaggacactctgggcactttcggcctgaacggactcgaccgtctcctgtgc
tttatgatagttaaggagctacagatgttcctgaccgtgcttcagaggatcatcctcaag
gacaaagctgtggttgatatctttaaagggctgctgaatgtcgtgaacccggtgaaaggc
attgtggccacagcaagtaaagtgtatgccaacgctgtagccaaaacacaaaagatctgg
cctggatatctggagtccattatgaaggtgggtcagatgcagatcctgaggctacagata
gcgaatgaattaaactattcctgcaagtttgattccaaacatctgggagcagctctggag
aatctaaacaactctctgctcgccgatattgaagctcattaccaggacccgagtctgccg
taccctaaagaggacaacaccctgctgtatgagttcactgcctatctggaagcagctgga
atacacaacccactgaacaaaatctacatcaccaccaagcgccttccgtacttccccact
gtcaacttcctcttcctcatcgcccaactgcccaaactccagtacaccaaaaaccaagga
atgacctgccggagagcagctgatcctgtggactgggttcctctcgtcctgggtttactg
acactgctcaaacagtttcactccagatacacagagcagttcctggctctcattgggcag
ttcatccgctccatcatggagcagtgcaccagtcaaaagatccccgacatgcctgcggat
gtggtcggagcgctgatgtttttggaagactatgtgcgttatacaaagctatccagaaag
gtggtggaagctcacatcccaagtttcatttttgatgaatttagaaccgtattgcagtga
DBGET
integrated database retrieval system
