Silurus meridionalis (southern catfish): 124375608
Help
Entry
124375608 CDS
T08004
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124375608 (dcaf13)
04121 Ubiquitin system [BR:
smeo04121
]
124375608 (dcaf13)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
90S particles
Other 90S particles
124375608 (dcaf13)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124375608 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
124375608
NCBI-ProteinID:
XP_046690070
LinkDB
All DBs
Position
21:13460097..13471359
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDFVRETSKDIQRVPRNYDPTLHPFEVPREYTRALNATKLDRVFAKPFVA
SLDGHRDAINCIAKHSKNLATVLSGACDGQVKIWNLSKRECMRTIQAHEGFVRGICSRFC
GTSFFTVGDDKTIKQWSMEAPGYGVKEEPLNTILGKAVHTGIDHHQKEGTFATCGQTVDI
WDEQRSSPIRSFSWGVDSFSCVRYNPVETELLASCASDRSIILYDMRESTPLKKVVMQLR
SNTLCWNPMEAYNFTCSNEDYNLYTYDMRRLDKPVTVHMDHVSAVLDVDYSPTGTEFVSA
SFDKTIRIFPKNSGHSRDVYHTKRMQHVICVKWSADSKYILSGSDEMNIRIWKANASEKL
GVLTSREKAAMHYNQKLKEKFQHYPQVKRIARHRHLPRDIFKQRRQLQEMREARRRKEHN
VRKHSTPGSVPVATEKEKHVVTVVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtgctttgccgaaacccggacgattttgttcgagaaacttctaaagat
atccagcgtgttcccaggaattatgatcctactctacacccgttcgaggtaccgagggag
tacacgagagccctaaatgccactaagctcgaccgggtattcgcaaagcccttcgtagca
tcgctggacggccacagagatgccatcaactgcatcgccaagcactccaagaatctcgcc
acagtgctgtccggagcctgtgatggacaggtaaagatatggaacctgagcaagcgggaa
tgcatgcgaacgatccaagctcacgaaggcttcgtcagaggaatatgctcgcgcttttgt
ggcacttcatttttcacggtaggagatgataagaccattaagcaatggagcatggaggcc
cctggttatggtgtgaaggaggaaccgttgaacactatactcgggaaggctgtgcacaca
ggcattgaccatcaccagaaagaaggcacttttgcaacatgcggccagacagtggacatc
tgggacgagcagaggagcagccccattcgctcctttagctggggggtggacagcttcagc
tgtgtccgttacaaccctgtagagactgaacttcttgccagctgcgcctcagacagaagc
atcatactgtatgacatgagagagtcaactccacttaaaaaggttgtaatgcaattgaga
agtaacacactttgctggaaccccatggaggcatataatttcacctgctccaatgaggac
tataatctgtatacctatgatatgaggcgcctggacaaaccggttactgtacacatggac
cacgtctcggccgtgctggatgtggactactcgcccacagggacagagttcgtgtcagcc
agtttcgacaagacgattcgcatcttccctaaaaacagtggccacagcagggacgtgtac
cacaccaagcgcatgcagcacgtcatctgtgtaaaatggtctgcggacagcaagtacatc
cttagcggctcagacgagatgaacatccgcatctggaaggccaacgcctcggagaaactg
ggagtgctcacatctagagaaaaggctgccatgcactacaaccagaagctgaaggagaag
tttcagcactacccacaggtaaaacgcatcgcccgccaccgccaccttcccagagacatc
ttcaaacagagacggcagctgcaggagatgagggaggccagacgccggaaggaacataac
gtacgcaaacacagcacgccgggctccgttcccgtggcgacagagaaggagaaacatgtg
gtgactgtggtggaataa
DBGET
integrated database retrieval system
