Silurus meridionalis (southern catfish): 124375610
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Entry
124375610 CDS
T08004
Symbol
rad21a
Name
(RefSeq) double-strand-break repair protein rad21 homolog A
KO
K06670
cohesin complex subunit SCC1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124375610 (rad21a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124375610 (rad21a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124375610 (rad21a)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
124375610
NCBI-ProteinID:
XP_046690073
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Position
21:16545807..16553555
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AA seq
641 aa
AA seq
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MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEDNREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFTLNQSRVEEITMREEVGNLSLMNDEHFGDFGIEDREILREEPAFEDT
AFMHGSSAANLLLEAEPGPAHPPDKSANLEYDDFGDNNLENSDGGILVDKLLSGDGGGGI
FDDPPAITDSVMMPPGHGDDDDDDFDHLSPAGAPDSPDSCPVEALPNTTDQTEQTTLVPN
EEEAFALEPIDITVKETKAKRKRKLIVDSLKELDSKTIRAQLSDYSDIVTTLDLAPPTKK
LMMWKETGGVEKLFSLPAQPLWNTRLLKMFTRCLTPLVPDELRKRRKGGEADSLEEFLKE
LENPEVPREEQLGQRTDIIDQTIVEEPSMLQTSSMEGSRTTLDETLMPPPSRQRGVKRKS
QEPEAALPTMSILDQSVPPPMEQSVLSQQLDMPQVDLPPEDSGNLSRIVTEFNLLGEKNK
DKEDSEEEDEEGDGQGGDQDQEERRWNKRTQQMLHGLQRVVAKTGAQSISLLELCRNNNK
KQAAAKFYSFLVLKKQQAVDLSQTEPYSDIIATPGPRFHIV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcccacttcgtcctcagcaagcgagggccgctggccaagatctggctggcg
gcccattgggacaagaagctgaccaaagcccacgtctttgagtgcaacctggagagcagc
gtggagagcatcatttcacccaaggtgaaaatggctctgcgtacatctggccacctgctc
ctgggggtggtgaggatctaccacaggaaggccaagtatctccttgctgactgtaacgag
gcctttataaagatcaaaatggctttcagaccaggggtcgtggatctgcccgaagacaat
cgcgaggctgcgtacaacgccatcaccctgcccgaggaatttcacgactttgatcagcct
cttccggatctcgatgacatagatgtagcacagcagtttacgctaaaccagagccgggtg
gaggagatcaccatgagggaggaagtggggaacttgagccttatgaacgacgaacacttc
ggcgattttggcattgaggaccgggagatccttagagaggagcctgcctttgaggatacc
gccttcatgcatggatcctcagctgccaacctcctcctggaggcggagcccggccccgcc
caccctcctgataagtccgctaatctcgagtatgacgacttcggagacaacaatctggag
aacagcgacggcggtatactcgtggataagctcttgagcggcgatggtggtggggggata
tttgacgatcctccggccattaccgatagcgtcatgatgcccccaggccacggagatgac
gacgatgacgactttgaccacctttcgccggctggagctccggacagccccgattcatgt
ccggttgaggctttacccaacactacagaccagacggagcagaccacgctggtgcccaat
gaagaggaggcctttgctcttgaacccatcgatatcaccgtgaaagagacgaaggcaaag
agaaaaaggaagctgatcgtcgacagcctgaaagagctcgacagcaaaaccatccgcgct
cagctgagcgattactcagatatcgtaaccacactggatctggccccgcccaccaagaaa
ctgatgatgtggaaagagaccggaggcgtggagaaactcttctctctgcctgctcagcct
ctgtggaacactagactgctcaagatgttcacacgctgcctcactccactggtgccggac
gagctcaggaagaggaggaagggtggtgaggccgacagcctggaggagttcctgaaggag
ctggagaaccccgaggttccccgtgaggaacagctgggccaaaggaccgacattattgat
caaaccattgttgaggagcccagcatgctgcagacctcatccatggagggcagcagaacc
acactggacgagaccctgatgcctcctccttcacggcagcgtggagtcaaacgcaagtcc
caggagcccgaagccgctctgcctacgatgagcatactggaccagtccgtgcctccgccg
atggagcagtccgtgttgtcccagcagctggacatgcctcaggttgaccttcctcctgag
gacagcggcaacctttcgagaatcgtgactgagttcaacctgctgggagagaagaacaag
gacaaagaggacagtgaggaggaagatgaggagggtgatggacaaggtggtgaccaggac
caagaggagagacggtggaacaaaagaacccagcagatgctgcatggacttcagcgtgtt
gtggctaaaaccggagcccagtccatcagcctgctggagctttgcagaaacaacaacaaa
aaacaagccgccgccaagttctacagcttcctcgtcctgaagaaacagcaggcggtggac
ctgtcccaaaccgagccttacagtgacatcatcgccacgccaggtccacggttccacatt
gtatag
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