Silurus meridionalis (southern catfish): 124375625
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Entry
124375625 CDS
T08004
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124375625 (cdh17)
Cell adhesion molecules [BR:
smeo04515
]
Cadherins
Major cadherins
124375625 (cdh17)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
124375625
NCBI-ProteinID:
XP_046690099
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Position
21:complement(11542883..11557552)
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AA seq
876 aa
AA seq
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MARAQLLFLALLVWSANGAGIEDKQGPLKNIHLVVPEATPVPYPIYQFTSTAEGVSSYSV
SGETEGIINISNDGWLYLEEALEWSPDKKHTLYIEALSANVVTIDGPYTIVIIVEDANNN
PPIFDQSQYSGSVREHSPAGIPFIRVFAKDADDPNSPNSHVTYSIESQIPNPSGEAFFTI
NPNTGEISTTDEGAAFLRARTGVSYSRGETRGDVNVLKKKFDEFCSPKKEIPLEDNPFFT
CVQHSEKRRLNAIQDPDYVLIVRVEDLGGQAPGALSSITRVSIAVTQNLWFSRGPISVVE
NLKVDYPMLLTTVRANDPNALYRLMQKEKEILFPFTINEDGEIYLTEPMDREKKDMYILV
VLAEDEQGVQLETPMEIQVLVEDVNDNAPKCIEADNVFEVQENQGVGSHVGDLLVHDADK
ENTLNSLLTYELLSQSPTRPSDGMFRITQTNGRIQVAKHNFRRKDVPQYDLEVLVTDGVH
STQCNVIIKIIDLNNEVPVFEKNDYGRHSVPELAEVGTILLTITATDDDDPGTGSSKLEY
HISAGDPDNVFAIDVVDATGEGKLYIARPLDYEVQSTYKLQIDVRNPEPLIEGVEYDNRS
TTVVVIELVDVDEPPAFTLQTVNVNIPENITVGTTILTADAKDPEGQKIMFKMEGDDLGW
LDLNAETGELKTKAELDREVVDKLNVRIIAYESEGQKQQSERELSIQLMDVNDNYPKLLK
TQGFICVKKPEPLLLTAVDGDAEPFGEPFTFTLQLRKSPNWEITPVNGTSAKLVMKKKPS
TDQTFNIPVNIKDNAGVGVTQRLEVRVCNCTQLGYCYVEPGSHAWKFGMFNTVAILVGVM
GFILLFLVIVICRIKKSEKKNKEEAALVDGETNAML
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagcacagctgctgtttctggctcttcttgtctggtctgctaatggagctggt
attgaggataagcaaggaccactaaaaaatatacacttggttgtgccagaagccacacca
gtgccatatccaatttatcagtttacatccacagcagagggagtgtcctcatactctgtg
agtggtgagacggaggggataattaacatctctaatgatggttggctgtaccttgaagaa
gcgctagaatggagtccagataaaaagcacactttatatattgaggcactttcagctaat
gttgtcaccatagatggaccctacaccattgttatcatagttgaggatgccaacaacaat
cctcccatttttgatcagagccagtatagtggaagtgtcagagagcattcacctgcagga
attccatttatacgtgtgtttgccaaggatgctgatgatccaaactcgcccaattcacac
gtgacctacagcattgagagccaaatcccaaatcctagtggtgaagctttctttaccatc
aacccaaatactggggaaatttctaccacagatgagggagctgcatttctacgtgccaga
actggagtgagttacagtcgtggggaaacacggggagatgttaatgttctgaagaaaaag
tttgatgaattctgctctccaaagaaagaaataccccttgaagacaaccctttcttcact
tgtgtccagcattcagagaagaggcgactgaatgccatacaggatccagactacgttctc
attgtgcgagtggaggatttagggggtcaggctccaggtgcactaagcagcatcacaagg
gtcagcattgctgtgactcagaatctatggtttagccgtggaccaatctcagttgtggag
aatttaaaagtggactaccccatgttgctcaccacggtgcgtgccaatgaccctaatgca
ctgtacaggctgatgcagaaggaaaaagagatcctttttcctttcactattaatgaagat
ggagagatttacctcactgagccaatggacagagagaaaaaggacatgtacatcctggta
gtcctggctgaggatgaacaaggcgtccagctggaaactcctatggagatacaagttcta
gtggaagatgtgaatgataacgctcctaagtgtatcgaagctgataatgtgtttgaggtg
caggagaatcagggtgttggaagccacgtcggagatctactggttcatgatgccgacaag
gagaacaccctgaactcactgctgacttatgagcttttaagccagagtcccacccgtcct
tctgatggaatgttcagaataacccaaacaaatggaaggatccaagtggccaaacataac
ttccggaggaaggatgtcccacaatatgaccttgaggttttagttacagatggagttcac
agcacacagtgtaatgttatcatcaaaatcatcgatctcaataatgaggtccctgtcttt
gagaagaatgattatgggagacacagtgttccggaattagctgaagtggggactattctg
ctaaccatcacggctacagacgatgatgatccagggacaggcagctctaagttggaatac
cacatcagtgccggtgatcccgacaatgtattcgccatagatgttgttgatgccactgga
gagggcaaactctacatagcccggccactggattatgaggttcaatctacctataagctt
caaattgatgttcgtaatcctgagccgctgatcgagggagtggagtatgataatcgttcc
accacggttgttgtcattgagctggtcgatgtggatgagcctccagcgttcactctgcaa
actgtgaatgtcaacatcccagaaaatatcacagtaggaaccaccatcctgaccgctgat
gctaaagatccagagggacaaaaaatcatgtttaagatggaaggagatgatcttggctgg
ctggatctgaatgctgaaactggggagttaaagactaaagcagagttggacagagaagtg
gtggataaactgaatgtccgaatcattgcctacgagtcagagggacagaagcagcaaagt
gagagggaattgtccatccagctaatggatgtaaatgataattaccctaagctactgaag
actcaaggattcatttgtgtgaaaaagccagagcccttgctgctgactgccgtagacgga
gatgctgagccatttggagaaccctttacttttactctgcaactccgcaaatctcccaac
tgggagatcaccccagtgaacggcacctcagctaagcttgtgatgaagaagaagcccagc
actgaccagacattcaacatcccggtcaacatcaaggacaacgcaggggtaggggttaca
caaaggcttgaagttcgagtatgtaactgcactcagctgggttactgttacgtggaacca
ggatcacatgcctggaagtttggcatgtttaatacagtggccattctagtaggagttatg
ggatttatccttttgttcctggttattgtaatatgccgcatcaagaaaagcgagaagaag
aataaggaggaggcagcgttggtcgatggggaaaccaacgcaatgctgtag
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