Silurus meridionalis (southern catfish): 124375627
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Entry
124375627 CDS
T08004
Symbol
klhl40b
Name
(RefSeq) kelch-like protein 40b
KO
K10473
kelch repeat and BTB domain-containing protein 5/10
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124375627 (klhl40b)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
124375627 (klhl40b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
BTB
BACK
Kelch_KLHDC2_KLHL20_DRC7
Kelch_6
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_2
NANM
Kelch_5
Rax2
BTB_BTBDG
BTB_KLHL33
BTB_SANBR
Motif
Other DBs
NCBI-GeneID:
124375627
NCBI-ProteinID:
XP_046690103
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Position
21:complement(3302558..3306122)
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AA seq
613 aa
AA seq
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MALPIDPMEEPRLYQQTLLQDGLCDLLENDTMVDCVLKIKDKEFPCHRLVLAACSSYFRA
FFKSGVEASKQHEIVLEDVEPGVMGMILKYLYTSSINVTEQNVQDIFALANMLQIPSIFT
VCVSFLQKRLSLSNCLAIFRLGLMLDCPRLAVSARNFACERFQLISRDEEFLQLSSSELG
AILASDSLNVETEQAVFEAVIKWVGHDKDKRFEELPKLLDCVRFRLVPEDFFTEQVEQHE
WLRSNPEITKKLQLVKNAYAGQLPEVKKTNKKLKEKKTEEDGEEEEEDQEELLPGILNDN
LRFGMFLRDLIFMITDVSSVAYDPTGNDCYMATISNQVPKNHCSIVTKENQIFVVGGLFF
NEENEEEQLSSYFLQFDSASLDWIGMPPMPSPRFLFGMGEAENCIFAIGGKELNEGEQTL
CSVLVYDRQNLKWGESVPLSYAVYGHGTVSHDGIVYVIGGKGDSKQCLNSVCAYDVKNAK
WKDLAPLKTARSLFGVTVYKNKIYVAGGVTENGLTDTVEVYDIKSNKWSEFVEFPQERSS
LSLITVGNSIYAVGGFAMFPSENSEELTPREMSDIWRYDESENKWNGVLREIRYASGATV
LGVRLNTLRLTKM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctctgccgatagaccccatggaggagcctcgactataccagcagacgctgctgcag
gatggcctctgcgacctgctggaaaatgacaccatggtagactgcgtgctgaagatcaag
gacaaggagtttccctgccatcgcctggtgctggctgcttgtagctcctacttccgggcg
ttttttaaatcaggcgtagaagcaagcaaacagcatgagattgtcctggaggatgttgaa
cctggcgtcatgggtatgattctaaaatacctctacacgtcaagcatcaatgtgaccgag
caaaacgtccaagatatctttgcactcgccaacatgctccaaatcccttccatttttaca
gtatgcgtctcatttcttcagaagcgcttgagtttgagcaactgcctggcaatctttcgc
ctgggactgatgcttgactgccctcggttggctgtctcagcccggaattttgcctgtgag
cgttttcagctgatatcacgagatgaggaattcctacagctcagttccagtgaattaggg
gcaatcctggcctcagactcactgaatgtggaaacagagcaggccgtatttgaggctgtg
atcaagtgggtgggccatgacaaggacaagcgttttgaggaactcccaaaactactggac
tgtgtgcgcttccgactcgttcctgaggactttttcacagaacaggtggagcaacacgag
tggctgagatctaaccctgaaattaccaagaagctgcagctggttaaaaacgcttatgct
ggacaacttccagaggttaagaagacaaataaaaaactcaaagaaaaaaagacagaagaa
gatggtgaagaggaagaggaagatcaggaagagttacttcctggaatcctgaatgataat
ttaaggtttggcatgttcctcagagacttaatatttatgataactgatgtcagttcagtg
gcttatgacccaactggaaacgactgctatatggcaacaatatccaaccaggttccaaaa
aatcactgcagcattgtaaccaaagagaaccagatttttgtggtaggtggacttttcttc
aatgaagagaatgaagaggaacagcttagctcatacttcttacagtttgactctgcaagt
ttagattggattggaatgccccccatgccctcaccgcgctttctgtttggcatgggtgaa
gcagaaaactgcatctttgcaatcggtgggaaggagttaaacgagggagagcaaacttta
tgctcggtcctggtttatgacagacaaaatttaaaatggggagagtcggttccactttcc
tatgcggtatatggccatggaacggtgtctcatgatggaatagtgtacgtaataggagga
aaaggagacagcaaacagtgcttgaacagtgtttgtgcttatgatgtaaagaacgctaaa
tggaaggatcttgcacccctgaagacggcgcgatcgctgtttggcgtcactgtttataag
aacaagatctatgtggctggaggtgttacagagaacggcctcactgacaccgtggaggtt
tacgacataaaatcgaacaagtggtctgagtttgtggagttccctcaggagcgcagctca
ctcagcctgatcactgtgggtaatagcatctatgctgttggtggcttcgctatgtttccc
agtgaaaacagtgaagagctcacaccaagagagatgagtgacatttggaggtatgacgaa
agcgagaataagtggaacggcgtcctgagagagattcgctacgcttcaggtgccacagtg
ttgggtgttcgtctaaacacactgagactcactaaaatgtaa
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