Silurus meridionalis (southern catfish): 124375640
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Entry
124375640 CDS
T08004
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04081
Hormone signaling
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124375640 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
124375640 (smad1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
124375640
NCBI-ProteinID:
XP_046690125
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Position
2:complement(6133481..6163307)
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AA seq
472 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSSCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCQFPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKLSMLPRFRNPLHQTEPHMPHNIKYPESFTQQ
PSNSLPFGPSSPSNSYPGSPNSGTASSTTFPHSPGSSEPSSPFQMPETPPPAYMPPEEPM
TQDCPQPMDTNLLAPNLPVEVNNRTDVQSVAYQEPKHWCSIVYYELNNRVGEAFQASSTS
VLVDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSI
FVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIR
MSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacgtcactgttttccttcaccagcccggcagtgaagcgcctcctgggctgg
aagcagggcgacgaggaggagaagtgggccgagaaggctgtggacgctcttgtcaagaag
ctgaagaagaagaagggcgctatggaggagctggaacgcgcgctcagctgccccggccag
cccagcagctgcgtgaccatcccgcgctcgctggacggacgactgcaggtgtcgcatcgt
aaagggctgccgcacgtcatctactgccgcgtgtggcgctggcctgacctgcagtcacac
cacgagctcaaagcgcttgagtgctgccagtttccgttcgggtccaagcagaaggacgtc
tgcatcaacccgtaccactacaagagggtggacagtccagttctgccaccggttctggtg
cctcggaacagcgagttcaacgccaagctgtccatgctgcctcgattccgcaacccgctg
caccagactgagccccacatgccccacaatattaaatatccagaatcatttacccagcag
ccgagcaacagcttaccatttggccccagctcgccttccaacagttaccctgggtcgccc
aacagcggtactgcgagcagcaccaccttcccacactcaccgggcagctctgagcccagc
agtccctttcagatgccagaaactccgccaccggcatacatgcctcccgaggagccgatg
acgcaggactgtccccagccgatggacaccaacctgctggccccaaatctgcctgtagaa
gtcaacaacaggacagatgtgcagtcagtggcctatcaagaacccaagcactggtgctcc
atcgtctactacgagctgaataaccgggttggagaagccttccaggcgtcttcgaccagc
gtcctggtggacggcttcaccgacccgtccaacaaccgcaaccgcttctgcctgggcctg
ctgtccaacgtcaaccgcaattccaccatcgagaacacacgccggcacatcggcaaaggc
gtgcacttgtactacgtaggaggtgaggtttatgccgagtgcctgagcgacagcagcatc
ttcgtgcagagccgcaactgcaactaccaccacggcttccaccccaccaccgtgtgcaag
atcccgagcggctgcagcctcaagatcttcaacaaccaggagtttgccgagctgctcgcc
caatccgtcaaccacggcttcgaggccgtctacgagctcaccaagatgtgcactatccgc
atgagcttcgtcaagggctggggtgctgaataccatcgtcaggatgtgactagcaccccc
tgctggatcgagatccacctccatggaccgctgcagtggctggacaaggttctcactcag
atgggctctcctcacaaccctatctcctccgtgtcctaa
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