Silurus meridionalis (southern catfish): 124375833
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Entry
124375833 CDS
T08004
Symbol
rims2b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 2
KO
K15297
regulating synaptic membrane exocytosis protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124375833 (rims2b)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
124375833 (rims2b)
Small GTPases and associated proteins
Rab associated proteins
124375833 (rims2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
124375833
NCBI-ProteinID:
XP_046690456
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All DBs
Position
22:1583487..1662601
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AA seq
1500 aa
AA seq
DB search
MSAPEMPDLSHLTEEERKIILSVMDRQKKEEEKEQSTLKRLHQQFEMYKDQVNKLGDEAQ
KNQIQKSDSPTCGICHKTKFADGCGRVCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQ
QEILTKSGAWFYGGAEGRTLGPEVKGHQDSSGLAVKNATVPVNRRRSPSASRTHKGDGLG
RSYHGDGVIRRSPSDSNRWRYHDPHLDVQMNDRELQRQREEEYRSRYRSDPNLARYPVKP
QPYEEQMRIHAQVSRARHERRHSDVSLAFTELDEAHNGYGGQRTASTRSYSMDRSSAAHR
TFSKTHHLDPGMIDGVLRTDSLSSDQSESMRPARSHRAGRFMAAGSFSSSEEEINTTPEY
TSCEDAELECESFGEKGDMDGHWWDYASWHNESSSVSMHPVTWQPSKDGDRLIGRILLNK
RMKDGTVPRDTGALLGLKVVGGKMTESGQLCAFITKVKRGSLADTVGHLRPGDQVLEWNG
RVLQGATFKEVYNIILDSKPEPQVELLVSRPIGDVPRISDSTHGQLESSSSSFESQKMGP
SISVTSPMSPGVLRDAPQHLSGQLSSPCLNRRTTPFVPRVQVKLWYDKVGHQLIVTILGA
KDLPGREDGRPRNPYVKIYFLPDRSDKSKRRTKTVKKSLEPKWSQTFMYSPVHRREFRER
MLEITLWDQARVREEESEFLGEILIELETALLDDQPHWYKLQTHDVSSMPLPNPSPYMQR
RFIQGESPTRRLQNKGSYYHGPGSQRISDSEFSDYEDGVGVISDHRHNGREFQSSTLSVP
EQVMSSNHRSRSDVMRNRSRSPSVPPPHSRSLDHGVRGPVHYGPRHRLSEDQYSPDRSSV
THPHRVRTRYHTIDTPFQDHSNLYPLYREDALKLLRSAKTTRSYSHRAYGSLERRMRSDR
RMSLYSDSYQSPERHYNSPNHVPSPWPNHLTNGSADEYRNFPKIEIEPSTDAEREEQIPE
FPASHQVFEEDLRYARVAADRHYRSRSADQRPMMERHFYTRSRSSERPEPSYMRSMPSLP
SRRSAPPSPALTRANPRAGSLQTSPLGTPASARRGRQLPQVPPKGSIDRNNGEGVAEPYE
EVTWEDQQKKVSGSGETITENGDAGSLKDPSRRGMDSLSMKSSDSDVSDVSAMSSTSRLS
SASYMSVQSERARAARKISRGEAVQQSQSQGEESVMGREASVEGGENEEEREKENGVEEA
EPDRAQTATPGSNITKSSSVGGEMCSLGRNDDDEDDKKRRSSFGAKMAAMVGLGKKSQST
SQLDPEDDGKKKKPARLAIQRSVETGLAIEMKSRMTRQLSRDTAEEGEKLKPGNLIFPGV
KISRDSQFTEFLDGLGPAQLAGRQTLATPPMGDIQIGMVHRKERLDVEVIRARGLVGKPG
NKQTPAPYVKVYLLDNGKCVNKKKTRLARKTLDPLYQQQLQFEESPEGKVLQIIVWGDYG
RMDHKSFMGAAQILLDDLELTNMVIGWYKLFPPTSLVDPTLAPLSSKAPERAAGKSSVRS
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccagagatgccggacctaagccacctgaccgaagaggagaggaagatcatc
ctctcggtcatggatcgacagaagaaagaagaagagaaggagcagtccacgttgaagagg
ctgcatcagcagtttgagatgtataaggaccaggtgaataagctcggtgatgaggctcag
aagaatcagattcagaagagcgactctcccacctgtgggatttgccacaaaaccaaattt
gcagacggctgcggccgcgtgtgttcttattgccaaaccaagttctgtgctcgttgcggc
ggccgagtgtctctgcgctccaacaaggtaatgtgggtgtgcaacctgtgccgaaaacaa
caagaaatcctcaccaagtccggagcctggttctacggaggtgctgagggccgaacgtta
ggacccgaagtcaaaggtcatcaagactcgtctggattagctgtgaaaaacgctacagtt
ccagtaaacaggagaagaagcccatcagcgtccaggacccacaaaggggacggcttagga
agatcttatcatggggacggagtcatacgtagatctccgtccgactcgaaccgctggcgt
taccatgacccccatttggacgttcagatgaacgatcgtgagctccagaggcagcgtgaa
gaggagtatcgttcgcggtaccgcagcgaccccaacctcgcacggtaccctgttaaacca
cagccctacgaggagcagatgcgaatccacgctcaggtttctagagcacggcatgaacgg
cgccacagtgacgtttccttggccttcactgaactcgacgaggctcacaacggttacggc
ggccagcgcaccgcgtcgacgcgctcatattcaatggacagaagctcggcggctcacagg
acgttcagtaaaacacaccatctggatcctggcatgatcgatggtgtgttgaggaccgac
tcgctcagctcagatcagtcagagtccatgagacctgcaaggagccacagagcagggcgg
ttcatggcggcggggagcttcagcagttcggaggaggagataaacaccacaccggagtac
accagctgtgaggacgcagagctcgagtgtgaatccttcggtgaaaaaggagatatggac
ggccactggtgggattatgcgtcttggcataacgagtcctcgtctgtgtctatgcacccg
gtgacgtggcagccgtccaaagatggagatcggttaatcgggaggattttactgaacaag
cggatgaaggacggcacggtgccccgagacacgggagctcttctgggcctcaaggtggtt
ggagggaaaatgactgaatctggtcagctttgtgcttttattaccaaagtgaaaagagga
agcttagcagatacagttggccatctccgaccaggtgatcaggttctcgagtggaacggc
agggttcttcagggagccacgtttaaggaagtttataatattattcttgattccaaacct
gagcctcaggttgagcttctggtctcgcggcccattggtgatgtacccaggatatccgac
agcacacacggacagcttgaatccagttcgagctcgttcgaatcgcagaagatgggtccg
tccatatccgtcacatctcccatgagtcccggcgtgctccgtgatgctcctcagcatctg
tccggacaactctcaagtccatgccttaatagaagaacaacgccttttgtccctagggtc
caggttaagctgtggtacgacaaagtgggccaccaactcatcgtcaccattctaggcgcc
aaagacctgccgggtcgagaggatgggcgtcccaggaacccctacgtcaaaatctatttc
cttcctgacagaagtgataaaagcaagagaagaacgaaaacagtgaagaagtcgctggaa
cctaagtggagccagacgttcatgtactcgcccgtgcacaggcgcgagttcagggagaga
atgctggagatcacgctgtgggaccaggcacgggttcgggaggaggagagcgagttcctt
ggagagattttaatcgagctggagacggccctgttggacgatcagcctcactggtataaa
ctccaaacccatgatgtttcctccatgccactgcccaacccttcaccgtacatgcagaga
cgcttcatccagggagagagtccaacacggagactgcagaataaaggctcgtattatcac
ggcccaggatcacagcgaatcagtgacagcgagttttccgattacgaggacggagtcggc
gtcatatcagatcaccggcacaatggcagagagttccagagctccaccctgtccgttccc
gagcaggtcatgtcgtccaatcaccgctctcgatcagacgtgatgcgcaatcgctctcgt
tctccgagcgttcctcctcctcacagtcggagtttagaccacggcgtcagaggaccggtg
cattacggacctcggcatcgactctcagaagatcaatattctcccgatagaagctcagtc
actcaccctcatcgagtccgaaccagatatcacaccatcgatacgcctttccaggaccac
agtaacttatacccactctatcgggaagacgccctgaagttgttgcgctcagctaagacg
acccgcagctactctcacagggcttatggtagtttggagaggaggatgaggagcgataga
agaatgtctctctacagcgactcatatcaatctccagagaggcattacaacagtcccaat
cacgttccctcaccatggcctaatcatctcaccaacggatctgctgatgagtacaggaac
ttccccaagattgaaattgagccttctacagatgcagaaagagaggaacagataccagag
ttcccagctagccaccaagtgtttgaggaggatctgaggtacgctcgcgtcgcggcggac
agacattacaggtcgaggtcagctgaccagcggcccatgatggaaagacacttctacacc
cgttctcgctcgtccgagcgtcccgaaccgtcctacatgaggtccatgccgtctttaccc
tccaggagatctgcccctccttctcctgccctaacgagggcgaatcctcgggccgggtcg
ctccaaacgagtcccctgggcacgccggcgtccgcacgcaggggccgacaattaccgcag
gtccccccgaagggctccattgaccggaataatggagagggcgtggcagagccttacgaa
gaggtgacgtgggaggaccagcagaaaaaagtctctggctcgggggagacgataacagag
aacggagatgcaggttctctgaaggatccatccaggcggggaatggacagcctgtccatg
aagtcctcggacagcgacgtcagcgacgtctccgccatgtccagcacgtctcggctcagc
agcgccagctacatgtccgtccagtcggagagagcgcgggccgctcgcaaaatcagccgt
ggcgaggctgtccagcagagtcagtctcagggggaggagagtgtaatggggagagaagct
agtgtagaaggaggagaaaatgaagaagaaagagagaaggagaatggagtagaggaggcg
gagcctgacagggctcagacagcgactcctggctccaacatcaccaagagctccagcgta
ggaggggaaatgtgctcgctcggcaggaacgacgacgacgaggacgacaagaagagacgc
tccagcttcggggccaagatggccgccatggtgggtctgggcaagaagagccagagcaca
tcacagctggatccagaggacgatgggaagaagaagaaaccggcacgtttggccattcag
aggagtgtagagacgggtttggccatcgaaatgaagagcaggatgacacggcagctgagc
agagacacggctgaggagggggagaagctcaaacccggaaatcttattttccccggcgta
aaaatctcaagagacagtcagttcacagagttcctggatggtttaggccccgcccaactt
gctgggagacagaccctggccacacccccaatgggtgacattcagatcggcatggtgcac
aggaaagagcgtctggacgtggaggtgattcgtgctcgaggtctggtgggaaaaccgggc
aacaaacagactccagctccgtacgtgaaagtgtatttactggacaacgggaagtgtgta
aacaagaagaagacgcgtctggcaaggaaaacactggaccctctgtatcagcagcagctg
cagtttgaggagagtcctgagggaaaagttttacagatcatcgtgtggggggattacggc
cgtatggaccacaagtcgttcatgggagcagctcagatcctgctggatgacttggagctc
acaaacatggtgatcggttggtacaaactgttcccccccacctcgctggtggatccgacg
ctggcccctttgagcagtaaagctcctgaaagagcagccgggaaatcaagcgttcgctca
taa
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