Silurus meridionalis (southern catfish): 124375893
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Entry
124375893 CDS
T08004
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124375893 (snx13)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124375893 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
Nexin_C
PX
PXA
RGS
Rep3_C
NCH1
HipN
Motif
Other DBs
NCBI-GeneID:
124375893
NCBI-ProteinID:
XP_046690559
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Position
22:17281551..17327037
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AA seq
761 aa
AA seq
DB search
MERKICRDVVCTSNKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLI
NQLSDPDYINQFIIWMIRDSSCNYEAFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTA
GDEINNIKNQINSLLFVKKVCETRIQRLQSGKEVDAMKLAANFGRLCIIPLDHILVHNIA
LQFFMDYMQQMGGQADLFFWLTVEGYRVTAQQQLEVLQSWQKDGRKQSGQTKGLLKAAAL
GVYEQYLSDKASPRVQVDRACVEKLAEKLNKEDPTPEIFDDIQRKVYDMMLKDERFYPSF
KQHPLYVRMLAELDMLKEPSYRGSDDGDAESFNGSPTGSINLSLDDLTNATTDESLPLHA
FISDTVDAPLTHVPVLGVCNDHGKTYALYAITVFRKNPDGSEDIWKTYRRYSDFHDFHMR
ITEQFENLNSILKLPGKKTFNNMDREFLERRKKDLNAYLQLLLNPEMVKACPMLIPYVYD
FLENKAYNKGKGDFARKMDTFVNPLRSSMRNVSNAVKSLPDSLAEGMTKVSDNMGRMSER
LGQDIKQSIFKVPPLIPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQ
WLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTSPEQVADYVKRFRDSYWPNGILAETP
PRRDKSIRMRTRVAAKTNLLGIMPDELKHIIGAETTRKGILRVFDMFQHQQLNRRLVYVF
LEGFLETMFPQYKFPELFVKLHSRSPRVRTYTQKVRTLQKR
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaagatctgcagagatgtagtgtgcacctcaaataaagatgaagaagggttc
ctgcgagatctgtgcgaggtgctgctgtatcttttactacctcctggagacttccacaac
aagaacatgagatacttcctcagggaaattttggcaagaggagtccttctgccgctcatt
aaccagctgagtgatcctgattatatcaaccagttcatcatctggatgatccgggactcc
agctgcaactacgaagccttcatgaatatcctgaaactgaccgacaagccagctgaacta
gaggctgtcaaagacaaagtactggaggagctccagtacctgcgctcactcgataccgca
ggagatgaaatcaacaatataaagaatcagattaacagtttactttttgtcaaaaaagtc
tgcgaaacaagaatacaaaggctacagtcggggaaggaagtggatgctatgaaacttgca
gcgaatttcggcaggctgtgcataatcccgctggatcatatcctcgtgcacaacatagcg
ctgcagttttttatggactacatgcagcagatggggggtcaggcggatctgttcttctgg
ctgacagtggagggataccgggtcacagcacagcagcagctcgaggttctgcagagctgg
cagaaggacgggaggaagcagagcggtcagactaagggtcttttgaaggccgctgcactc
ggtgtctacgagcagtacctctctgacaaggcatctcccagagtgcaagtggatcgggcc
tgtgtggagaaactggccgagaaactcaacaaagaggatccaaccccagagattttcgac
gatatccagagaaaggtgtacgatatgatgttgaaggacgaacggttctacccttcgttt
aagcagcaccccctgtatgttcgcatgctggctgagttggacatgctgaaggagccgagc
tatcggggatcagacgacggcgacgcagagtcttttaatggatccccaactggaagcatt
aatttgtctttggatgacctcaccaacgccaccacagacgagtcattgccgctgcatgct
tttatttccgataccgtcgatgctcctctaacccacgttcccgtgctaggcgtgtgtaac
gaccacgggaagacttacgccctgtacgccatcaccgtcttccggaagaaccctgacggc
agtgaggacatctggaagacctaccgccgctacagcgacttccacgacttccacatgcgc
atcaccgagcagtttgagaacctcaactcgatattaaaacttcctgggaagaaaacgttc
aacaacatggacagggagttcctggagagaaggaaaaaggatctgaatgcgtatttgcag
ctgcttctgaatccagagatggtgaaagcctgccccatgctgattccttacgtctacgat
ttcctggagaacaaggcgtacaacaaaggcaagggcgacttcgcacggaagatggacacg
tttgtgaaccctctgcgtagctccatgaggaacgtgtcgaacgcggtgaagtcgctcccc
gacagtcttgccgaaggaatgaccaaagtgtcggacaacatggggcgcatgtccgagaga
ctgggtcaggatatcaaacagtccatattcaaggtgccgcccttaatcccaaagtcagac
atcgaccctgaacattgccgagtgtctgctcagctggatgacaatgtggacgataacatc
cccctgcgtgtgatgctgctgctgatggatgaggtgtttgacctgaaggagaggaatcag
tggcttcgcaggaacatcaagaaccttctacagcagctcatcagagccacgtatggagac
acaatcaacaggaaaatcgtggatcacgtggacttcatgacgtctccagaacaagtagcc
gactacgtcaagaggttcagagattcctactggccgaacggaatcctggcggagacgccg
ccacgccgagacaagagcatacgcatgagaaccagagtagcagctaagactaacctcctg
ggcatcatgccagacgagctgaagcacatcatcggggcggaaacgacacgcaagggcatc
ctccgggtcttcgacatgttccagcaccagcagctgaaccgccgcctggtctacgtgttc
ctggagggcttcctggagacgatgttccctcagtacaagttccccgagctgttcgtcaag
ctgcactcgcgctcgccccgcgtccgcacttacacccagaaagtccgcaccttacagaag
aggtga
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