Silurus meridionalis (southern catfish): 124375900
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Entry
124375900 CDS
T08004
Symbol
brd4
Name
(RefSeq) bromodomain-containing protein 4 isoform X1
KO
K11722
bromodomain-containing protein 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124375900 (brd4)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124375900 (brd4)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124375900 (brd4)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: Other
BRD family [OT]
124375900 (brd4)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Brd4/P-TEFb complex
124375900 (brd4)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124375900 (brd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BET
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
124375900
NCBI-ProteinID:
XP_046690573
LinkDB
All DBs
Position
22:4122197..4173977
Genome browser
AA seq
1548 aa
AA seq
DB search
MDYKMHSKSNDLLDFQTLDALLEKIAHYSGAVKRDPSEECNGIGGALPAEAAPGSRLNEW
CPVAPPAPHPPPPPPPPPAPVTALRPTSMGDGLDAAPMSGSSSSSQGQPQSQSQLSHLLN
PPPPEVLNAARPKRQTNQLQYLLKVVLKNLWKHQFSWPFQAPVDAVKLNLPDYYKIIKNP
MDMGTIKKRLENSFYFNAQECIQDFNTMFTNCYIYNKAGDDIVLMAEALEKLFLQKISEM
PQEENEIAVMTPKGRGRGRRDPGLNLKPPGPPGLDSPSTTPQTRGISNHGPGPQTRGPIP
GPPALPPQVALQQALPPRVPPTIPQLGPPFPLGPADCNPPSTIMTSVPLPTQTALPPMPI
QQSPAPMLQSVMPKQRKSQKRKADTTTPTANDQLSESSPAESKSGKTLPRRESVRPSKQP
KKEAPDSQHHLGFSVPAGPCSPKVLEQLRYCSGIVKEMLAKKHTAYAWPFYKPVDVESLG
LHDYHDIIKHPMDLATIKDKLDTRQYRDAQEFAADVRLMFSNCYKYNPPDHEVVVMARKL
QDVFEMRFAKMPDEAEEVFTPAPAPVLHPALHPAAPVKPQPPIAAPSSSDSSSDSSSESE
SSTDDSEEERAQRLAELKEQLKAVHEQLAALSQPQASKPKKKEKDKKEKKKEKHKKKAIP
GLDEILEAPSALPTPKSKNKNNKDPLPKKTKKPSKKEGIKNNRSIPAPGVVNPILQPLPC
PDPMEELALAGGPGSTGLVPGEKCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPS
LKNSNPDEIEIDFETLKPSTLRELERYVSSCLRKKKKPPEKTMETMSAKPKGSSSDSGSS
SESSSSDSEDSESGMASKMKKRGHSAKEGKKGHHPVIAPGIVQIPLQAQAPVLQPTVHIK
QQQQQQPQPQPPPQQQQQQHPSPAAYMAPPVTALESSQLLENTFDSLPHFGQSLMPMPHH
ANDSSSPAPPHLNAHTASGPESPDTHPFLNQHPILQPPALHSAMPQQPSRPSNRAAPLPS
KPPQPTTPQQPLQLQPQQPPQPQHHLPPHLLHPPQPIRQRPLSPPTLTPQGLLSSQPPQL
LLEDDEEPVPTMPINQVLFLQHHLQQGRQQQQVPLMQSLQSRQAQPPSQTSLLQTVQVQS
QLPVPTQMPVQTQPQAAPAHQPSPQMPTHTPRHMQQSQSQQQQLAFSQGPVQTTQTQPAQ
HKVAMTPNKAQQQIIQQQQQQQHPSPRQHKPDPYSTGHLRENPSPLMMHSPQISQYPPVV
HQSPPQNIQPKKEPQRGPPALSLLKEEKQPPSPIMRSESFSPPIRQEPHKQPESKTQMQG
HGQQRPDMKPLDTSRPVIRSSDQSGPPPTMPEKDKFKQEPKTPVAPKKVQDVKLKNMGSW
ASLAQRSTSTPSSAVKSSSDSFEQFRRAAREKEEREKALKAQAEQAEKDRLRREQEKQRG
RDDDDSMEVARRPHEEQRRRSEHQQAQAPPPQQQHQTPSQTPNQQPQTPSATQPPQAPPQ
SPASNQNANDREIARRREQERRRREAMAATIDMNFQSDLMAIFEENLF
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggattacaagatgcattccaagtccaatgatttgctggattttcagacactggatgcc
cttttggaaaaaattgcacattattcaggagctgtaaaaagagatcccagcgaggagtgc
aatggaatcggcggcgctctccctgcagaggccgcgccaggctcgaggctgaacgagtgg
tgtcccgtcgcccctcctgctcctcatcctcctccaccacctccgcctccacccgccccg
gtgaccgcgcttcgtccaactagcatgggtgacggtctggacgccgcaccgatgtcaggg
agcagcagcagcagtcaggggcagccccagtcccagtcccagctctctcacctcttaaac
ccccctcccccagaggtcctcaatgcagcacggcccaagcgccagaccaaccagctgcaa
tacctgctcaaggtggtgctcaagaacttatggaagcaccagttctcgtggcccttccag
gctcccgtcgatgcagtaaagcttaacctacctgactattataagataattaaaaaccct
atggacatgggaacaatcaagaaacgactcgagaacagcttctacttcaacgcccaagaa
tgtattcaagacttcaacaccatgtttaccaactgctacatttacaataaggcaggggat
gacatagtcttaatggccgaggcactggagaaactgttcctccagaagatttcggaaatg
ccccaggaggagaatgagattgcagtcatgactcctaagggccgtggtcggggcaggagg
gacccagggttgaacctaaagccccctggacctcctggtttggattccccatcaacaacg
cctcagactcgtggtatttctaatcacggaccagggccacagactagaggacccataccg
ggtcctccagctctccctccacaagtggctctgcagcaagctctaccccctcgtgtcccc
cctacaatcccccagctgggtccgccctttcctctcggccctgcagactgcaaccctccg
agcaccatcatgacctctgtcccgctaccgacgcagactgctcttccacccatgcccatt
caacagagtcctgcaccgatgcttcagagcgtcatgcctaaacagagaaaaagccagaag
aggaaagcagacacgacgactcccaccgccaacgaccagctgagcgagtcctctcccgca
gaatccaagtcggggaagaccctcccccggcgagagagcgtgcggccgtctaaacaaccc
aagaaagaagcgccggattcccagcaccacctcggcttcagcgtgccggccggcccctgc
agccccaaagtgctggaacagctgcgctactgctccggcatcgtgaaggagatgcttgct
aagaagcacaccgcttacgcgtggcctttctacaaaccggtggatgtggagagtctggga
ctgcatgactaccatgacatcatcaaacaccccatggacctcgccaccatcaaggacaaa
ttggacaccagacagtacagagacgcgcaggagtttgcagctgacgtgcggttaatgttc
tccaactgctacaagtacaaccctccagaccacgaggtcgtggtgatggcgcgcaagctg
caggatgtgttcgagatgcgctttgctaaaatgccagacgaggcagaggaggtctttacc
cctgcgcctgcccccgtgctgcaccccgcactgcaccccgctgcccccgtgaaaccccag
ccgcccatcgccgctccctcgtcctccgacagctccagcgactcctcgtccgagtcggaa
tcctccaccgacgattcagaggaggagagggcgcagagactggctgaactcaaggagcag
ctcaaggcggtccacgagcagctggcagccctgtctcaaccccaggccagcaaaccaaag
aagaaagaaaaggacaagaaggaaaagaagaaggaaaagcacaaaaagaaagccatccct
ggactggacgagatcctcgaggctccttctgctctcccgacgccgaaaagcaagaacaag
aacaacaaggatcctctgcctaagaagaccaagaagccaagtaagaaggagggcattaag
aacaaccgctccattcctgccccaggcgtcgtgaatcccatccttcagcctttaccctgc
cctgaccccatggaagagctggctctggcagggggaccaggatccacaggcttggttcct
ggtgagaagtgcaagcccatgtcctacgaggagaagaggcaactgagcctcgacatcaac
aagctgccgggggacaagctgggccgcgtggtccacatcattcagtctcgcgagccctcg
ctgaaaaactctaacccggacgagatcgagatcgactttgagacgctgaaaccctccacg
ctgcgggagctggagagatacgtctcttcctgtctccgcaagaagaagaaacctccagag
aagaccatggagacgatgagcgccaagccgaaaggctcgtcttcagactcgggtagcagc
agtgagtcaagttcgtctgacagcgaagactccgagtcaggaatggcctctaaaatgaag
aagagaggtcactctgccaaagaggggaagaaaggccaccacccggtcatagctccaggt
atagttcagatacccctccaggcgcaggctccagtcttacagccaactgttcatataaaa
cagcagcagcagcaacaacctcagccgcagccgccgccgcagcagcagcagcagcagcat
ccgtctcccgcagcatacatggctcctccagtcacggctctggaatcatcccagctactt
gagaacacgtttgactctttgccccacttcggacagtccctcatgcccatgcctcaccat
gccaacgactcgtcctctcctgcccctcctcacctcaacgctcacacagcaagtggccct
gagtcacctgacacgcacccgttcttaaaccagcaccccatccttcaacccccagcactg
cacagcgctatgcctcagcagccttctcgtcccagcaacagagcggcgccgctcccctct
aaaccccctcagcccacgactccccagcagcccctgcagctccagccccagcagcctcct
caaccccagcatcacctccctccacacctcttgcacccccctcagcccatccgccaaaga
cctctgtcccctcctacgctcaccccgcagggcctgctctcctcacagcctcctcagctg
ctgctggaggacgacgaggaacccgtgcccaccatgcccatcaaccaggtcctcttcctg
cagcaccacctgcagcagggtcgacagcagcagcaggtcccactaatgcagtccctccag
agccgtcaggcgcagcctcctagccagacttccctgctgcagactgtgcaggtgcagtca
cagctgcctgtgccgactcaaatgcctgttcagactcagccccaggctgctccagcgcac
cagccctcaccgcagatgcccacgcacacacccaggcacatgcagcagtcgcagagccaa
cagcaacagctggccttctcacaaggtccagtgcagaccacgcagacgcagccggcgcag
cacaaggtggccatgaccccgaataaagctcaacagcaaatcattcagcagcagcagcag
cagcagcatccttctccacgtcaacacaagcctgatccctacagcacaggccacctgaga
gagaacccgtctcctctgatgatgcattcccctcagatttctcagtatcctcctgtagtc
catcagtctcctccacaaaacatccagcccaaaaaagagccgcagcgagggccaccagca
ctcagcctgctgaaggaagagaagcagccaccttcgccaatcatgaggagcgagtccttc
agccctcccatacgacaagaaccacacaaacagcctgagagcaaaacacaaatgcaaggt
catgggcagcagaggcctgacatgaagcctctggacacgtctcgccccgtgatccgctcc
tcagaccagagcggtccaccccccaccatgccggagaaggacaagttcaaacaggagccc
aagactcctgtggcgcctaaaaaggtacaggatgtgaagctgaagaacatgggctcgtgg
gccagcctggcgcagaggtccacatcgacgccgtcgtccgcggtgaaatcgagcagcgac
agcttcgagcagttccgccgtgcggcccgggagaaggaggagagggagaaagctctgaag
gctcaggcggagcaggctgagaaagaccggctacgcagagagcaggagaaacagaggggg
cgtgatgatgatgattcgatggaggttgctcgaagaccccacgaggagcagaggaggcgc
tcggagcaccagcaggctcaggctcctccaccgcaacagcagcaccagaccccctcccaa
acgccgaaccaacagccccagacaccgtccgccacgcagccgccacaggctccgcctcag
tctccggcctccaaccagaacgccaacgatcgagagattgcacgccgccgtgagcaagag
aggaggaggagagaggcgatggcagcaaccatcgacatgaatttccaaagcgatctgatg
gcgatcttcgaggagaacttgttttga
DBGET
integrated database retrieval system
