Silurus meridionalis (southern catfish): 124375907
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Entry
124375907 CDS
T08004
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03320
PPAR signaling pathway
smeo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
124375907 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
124375907 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smeo01004
]
124375907 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124375907 (slc27a1a)
Lipid biosynthesis proteins [BR:
smeo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124375907 (slc27a1a)
Transporters [BR:
smeo02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
124375907 (slc27a1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124375907
NCBI-ProteinID:
XP_046690592
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Position
22:3835695..3856043
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AA seq
643 aa
AA seq
DB search
MRYVVSLGSLGLLRLLGAPWSWSVAAGLGLYLGTGGWRYLYVAARTARRDLHGVLVLLRV
KLVLWRHMHNGSTIPSIFTQTVARHPDKPALVYEVTGETWTFSELDQLSNGVAQWALGQG
WGSGDVVALLMESRPLQVALWLGLAKIGIESALINFNLRRDSLMHCLGVSRSRALVFGAE
LADAVSEVRSSLSDSMALFCTGELSPDHMASLKAQPFDPLLASAPRHPPSCTPSKGFSDR
LFYIYTSGTTGLPKAAIIVHSRYFRMAAFGYYAFGMKPDDIVYDCLPLYHSAGNIIGVGQ
CLINGLTVVVKKKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRSSERGHRVRLAVG
NGLRPSVWEAFTQRFGIKQIGEFYGATECNCSIANMNGKIGSCGFISMILPSVYPIRLVK
VNEENMELVRNKDGLCVPCQPGEPGLLVGKINQQDPLRRFDGYANQEATRKKIAYNVFKK
NDSAYLSGDVLVMDELGYMYFRDRGGDTFRWKGENVSTTEVEGTLSSLLGQTDVAVYGVT
VPGVEGKAGMAAIADCTGNFNCESFLREVQKVLPPYARPVFLRISPQVDTTGTFKIQKTR
LQKEGFNPRITSDRIYFLNSRAGRYEAVTGEMYNALVEARIPL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatgtcgtgtctctcggctctctcggcctgctccggctgttaggcgcgccctgg
tcctggagcgtggccgccggactcggcctgtacctgggcaccgggggttggagatacctg
tacgtggccgcgcgcaccgccaggagagacctccatggtgtcctggtgctcctgagggtg
aagctggtgctgtggcgtcacatgcataatggcagcaccatcccctccatcttcacccag
actgttgcacggcacccggacaaacccgccctggtgtacgaggtcacaggagaaacatgg
accttctccgagctggaccagctgagcaacggcgtggctcagtgggctctgggtcagggc
tggggctcgggggatgtggtggctctgctgatggagagcagacctctgcaggtggctctg
tggctcggcctggctaaaatcggcatcgagtcggcgctcatcaactttaacctgaggcga
gactctctaatgcactgcctgggcgtgtcgagatcacgggcgcttgtttttggggcggag
cttgctgatgccgtgtcggaggtgagatcctctctgagtgactcaatggctctcttctgc
accggagagctgagtcctgatcacatggcctcactcaaagctcaacctttcgacccgctg
ctggcgtctgcaccacgtcaccctccttcctgcaccccatctaagggcttcagcgatcgt
ttgttctacatttatacctccggtacaaccggacttcccaaagctgctataattgtgcac
agtcggtattttagaatggccgcttttgggtattatgcattcggcatgaagccagacgac
atcgtgtacgactgcttacctctctatcattcagcaggtaatataattggtgttggccag
tgtttaatcaacggactgacggtggtggtgaagaagaagttctcagctagccgcttctgg
gaagactgcattaaatacaactgcactgttgtgcagtacatcggtgaaatctgccgttac
cttttgtctcagcccgtgcgctcatccgagcgtgggcaccgtgtgcgcctggctgtaggt
aatgggctccgccccagcgtctgggaggcctttactcagcgattcggcattaaacaaatc
ggcgagttctacggagctacagagtgtaactgcagcatcgccaacatgaacggcaagatt
ggatcgtgtggtttcatcagcatgattttgccgagcgtctaccccatccgcctagtgaag
gtaaacgaggagaacatggagctggtgaggaacaaggatggactttgtgttccatgtcaa
ccaggagaacccgggctgctggtgggtaaaatcaaccagcaggatcccctgcgtcgcttc
gacggctacgccaatcaggaggccaccaggaagaagatcgcctacaatgttttcaagaaa
aacgactccgcctacttgtcaggtgacgttttggtgatggatgaactgggctacatgtac
ttccgggaccgtggtggggacacgtttcgctggaagggtgaaaacgtctccactactgaa
gtggaaggaaccctaagcagcctgctgggccagacggacgtggcagtgtatggagtcact
gtgccaggtgtggagggaaaagcagggatggccgcaatcgccgactgcacggggaacttt
aactgtgaatcctttctcagagaagtccagaaggtgttgcctccgtacgctcggccagtt
tttctccgcatctccccacaagtagacactacaggtacattcaaaatccagaagaccagg
ttacagaaggagggatttaacccccgcatcacatcagaccggatctacttcctgaactcc
agagcagggcgttacgaggcagtaactggggaaatgtataatgccttagtggaagctagg
atacctctgtga
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