Silurus meridionalis (southern catfish): 124375924
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Entry
124375924 CDS
T08004
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic isoform X1
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124375924 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smeo01007
]
124375924 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124375924 (yars1)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124375924 (yars1)
Enzymes [BR:
smeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
124375924 (yars1)
Amino acid related enzymes [BR:
smeo01007
]
Aminoacyl-tRNA synthetase
Class I (A)
124375924 (yars1)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124375924 (yars1)
Prokaryotic type
124375924 (yars1)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
124375924 (yars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
124375924
NCBI-ProteinID:
XP_046690677
LinkDB
All DBs
Position
22:complement(12072440..12079370)
Genome browser
AA seq
543 aa
AA seq
DB search
MKLHGARSVSKGRQGTMAEQLSPDEKFNLITRNLQEVLGEEKLKTVLQERELKMYWGTAT
TGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVQYYEQVIKAM
LESIGVPLDKLKFIKGTDYQLSREYTLDVYRLSSIVTEHDAKKAGAEVVKQVDHPLLSGL
LYPGLQALDEEYLKVDAQFGGVDQRKIFTLAEKYLPSLGYAKRIHMMNPMVPGLTGAKMS
SSEEESKIDLLDRKEDVKKKLKKAFCEPGNIQNNGVLSFVKHVLFPLHSEFVIKRDPKWG
GDKVYTCYEEVEKNFAEEQIHPGDLKASVEVALNKLLDPIRKKFETPELKKLTNAAYPSK
TKAAAKVNPKKAEEEDEIIPSRLDLRVGKVVSVEKHPDADSLYLEKIDVGEEQPRTVVSG
LVAYVSQDDLQDRLVVMLCNLKPQKMRGIESQAMLLCASLEGEPKRVEPLDPPEGSAPGD
RVFVDGYASGTADDELKPKKKVFEKIQVDMKVSDECIAQWNKKDLMTKLGKITCKTLKGG
SIC
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcatggagcaagatctgtgagtaaaggcaggcagggcaccatggctgagcaa
ctgagtcctgatgagaagtttaacctcatcactcgaaacctgcaggaggttctcggggag
gagaagctgaagacggttcttcaggaaagagagctaaagatgtattggggcacagcaacc
acaggcaagcctcatgtagcctactttgtccctatgtctaagattgcggacttcctgaag
gctggctgtgaggtgaccatcctttttgctgaccttcatgcttacttggacaacatgaaa
gcaccatgggagctgctcgagctccgggttcagtactatgagcaggtcattaaggccatg
ttggagagtattggggtccccctggataagctgaagtttatcaaaggcacagattaccag
ctgagcagagagtacacactggatgtgtaccggctctcatccatagtgactgaacacgat
gcaaagaaggctggtgctgaagtggtgaagcaggtggatcatcctctcctgagcggcctg
ctctatcctggattacaggccctagatgaggagtatttaaaggtggatgctcagtttggg
ggagtggatcagaggaagatcttcactttggctgaaaagtacctgccctctttaggttac
gctaaacggattcacatgatgaaccccatggtgcctggcctaactggagccaagatgagt
tcttctgaagaagaatccaagatagacctgcttgacaggaaagaggatgtaaagaagaaa
ctgaagaaggccttctgcgaacctggaaatatccaaaacaatggagttctttcctttgtc
aagcatgtcctcttcccactgcattctgaatttgtgattaaaagagatcctaagtggggt
ggagacaaagtttacacatgctatgaggaagtagagaaaaactttgctgaggagcaaatt
catcctggtgatttaaaggcgtcagttgaggtggccctaaataaacttctggatcccatc
aggaaaaagtttgagacaccagagttaaagaaactgaccaatgcagcctatcccagcaaa
accaaggctgcagcaaaagtgaaccccaaaaaggcagaagaggaggatgaaatcattcca
tccagactggatctccgagtggggaaagtagttagtgtagagaagcacccagatgcagac
agcctttatttagagaagattgatgttggagaagagcagcctcggactgttgtgagtgga
ctggtggcctacgtttcccaggatgatctacaggaccgacttgtggtaatgctgtgcaat
ttgaagcctcagaagatgcgggggatcgagtctcaggcgatgctgctctgtgcgtcactt
gagggtgagcccaaaagagtagagcctttagatccgcctgaaggatcagcaccaggagat
cgtgtcttcgtagatggatatgcatcagggacagcggatgatgaactcaagccaaagaag
aaggtgtttgagaagattcaggtggatatgaaggtctcagatgagtgtatagctcagtgg
aacaagaaagatttgatgaccaaactaggaaagatcacctgtaaaacattgaagggtggc
agcatttgctaa
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