Silurus meridionalis (southern catfish): 124375942
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Entry
124375942 CDS
T08004
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04136
Autophagy - other
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124375942 (wipi2)
04136 Autophagy - other
124375942 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124375942 (wipi2)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124375942 (wipi2)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
124375942 (wipi2)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124375942 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
Beta-prop_IFT140_1st
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
124375942
NCBI-ProteinID:
XP_046690711
LinkDB
All DBs
Position
22:8526066..8533043
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AA seq
425 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCSLSISNDNCYLGYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKPQEEPTTWTGYFGKVLMASTTYLPAQVSEMFTQGR
AFATVRLPFSGHKNICALAIIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLDGS
AEPANEILEQTSHERPLVAQTYSTAIAKGYPEDQGAVGGAGVEDDVNALHLDEENEQPPL
ILETD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttc
aaccaggacaacacgtccttagcagttggtacgaaatccggatacaagttcttctctttg
tcctcagttgacaaattggaacagatttatgaatgtactgacacggaagatgtctgtatt
gtggaaagactgttctccagtagccttgtggctattgtgagcctcaaggcacccagaaag
ctcaaagtgtgtcattttaagaagggaaccgagatatgtaactacagctactcaaacact
atcctggctgtgaaactaaacagacagaggttgatagtatgtctggaagaatcgctgtat
atccacaacatcagggatatgaaagtgctgcatacgattcgagagactcctccaaatcca
tcaggattatgctcactttcaatcagtaatgataactgctacctggggtatcctggaagt
gcaacaataggggaagtgcaggtttttgacaccgttaatctgagggccgctaacatgatc
cctgctcatgacagcccgttagcagcactggctttcgacgccagtggaacaaaacttgcc
acggcttctgagaagggaacggtcattcgggtgttctccattccagagggccagaagctc
tttgagttcaggagaggggtgaagagatgtgtgagtatctgctccctggccttcagtatg
gaaggactttatctgtctgcctcaagcaacacagagacagttcatatctttaagctggag
acacagagagaaaagcctcaggaggaacccactacttggacaggttactttgggaaagta
ctgatggcctccactacgtatctgcctgcgcaggtgtccgagatgttcacacaaggccgg
gccttcgctacagtcagactgccattttcaggacacaagaacatctgtgctctagctata
atccagaagattccccgacttttggtggcggcggcagacggctacctttacctgtacaac
ctggacccacaggaaggcggagaatgcacactgatgaagcagcacaagctagacggaagt
gcagaacctgcaaatgaaatcctagagcagacgtcccatgagcgcccactagtggcacaa
acatacagcactgccattgccaaaggttaccccgaggatcagggcgcggtaggcggcgct
ggtgtggaggacgatgtgaacgccttgcacctggacgaggaaaacgagcagcctccacta
atcctagagaccgactga
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integrated database retrieval system
