Silurus meridionalis (southern catfish): 124375944
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Entry
124375944 CDS
T08004
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124375944 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
124375944
NCBI-ProteinID:
XP_046690714
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Position
22:complement(14367987..14481450)
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AA seq
764 aa
AA seq
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MKSNHERSNECLPPKKREIPACTLPSEDRPMVMAPASESQRGGNLAWLASMASSHESNKQ
RTSSSAEAGGPHSKPTVSTVESTRALLTAASTIPTVCTSPLSQQAGTIQYSPMPPNLHFI
SPPYASPYASYISPLVPPAATTTTSSHRHTEAYTGTTNSLASKPDPVISTSDCIPQPHST
QFVQISSSQLSVVPCTASSPQSHLPLHLQQSLALSGSSQLLLHYSETPMLKKEDSRPREM
LNGEQERGRRFNQPSESKVSSLAKGSLSTQHHHIHQRDHYDNRHMTIPPEYAQENTNLRN
SLVLVPNSHNHSSADPGGNLDKLPPPLAPVEKGGICAGKPVSRTPSSTSLPFPPPSLPVD
GLKAAVTTLSPHAVIHTTHSATEPLSLGLTSTNFYHAHQPIIGYIAGAGQPQSFSYHTSL
PPHLLIPGTQPVIIPVSGAEAPATSTAPTFAAALPHAFVTSAAPKGESFETPASYPHPTG
AVVQAQLHLPILPTCASLPATPPIPSTPSLPPYFTKGSIIQLADGELKRVEDLKTEDFLQ
SAEISSELKIDSSTVERIDSSHTPNSAIIQFAVGEHRSQVNVEVLVEYPFFVFGQGWSSC
CPDRTTQLLELPCARLAVGDVCISLTLKNLKNGSLKKNQGQISDATSLGPPLKPPFKAPS
GVTRRAARHTEQENGLAQCGRQGGVSSQTSKENGELGVCEKGAWKIPLSSESISKPAGRK
RRWSAPEGRKVEKPEEEPPSTLPRSSFISQEVKISIEGRSNIGK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaaaccatgaacgaagcaatgagtgtttacccccaaagaaacgggaaattcca
gcatgtacccttccctctgaggataggcctatggtaatggcgcctgccagcgagagccag
cgaggagggaaccttgcttggcttgccagcatggccagcagccatgagagcaacaagcag
cgcaccagcagctcagccgaagccggcggtcctcattctaaaccaacagtgtccactgtc
gagtccactcgtgcactactaactgcagcatctacaatacccacggtgtgtacttcacca
ctttctcaacaggcgggcaccatccagtactctcccatgccacccaacttgcactttatc
agccccccatatgcatctccctatgctagctatatttctccccttgtgccccctgcagcc
accaccaccacgtcctcccatcgacacactgaagcctacactggcactacaaattctcta
gcatccaaaccagatccagtcatttccacttcagactgcatacctcaaccccattccacc
caatttgttcaaatttccagttcccaactcagtgtagtgccttgtactgcatcctcaccc
caaagccatcttcctcttcacctacaacagtcactagctctaagtgggtcctctcagctc
ctacttcactactccgaaacacccatgcttaaaaaggaagatagcagacctagggagatg
ctaaacggtgagcaggaaaggggccgtcgctttaaccagccttcagaatccaaggtcagc
agcttagcaaaagggtctttatccacccagcaccaccacatccaccagcgagaccactat
gacaaccggcacatgacaattccaccagagtatgcacaggaaaacaccaatttgaggaac
tctttagttttagttcccaacagtcacaaccacagcagtgctgatccagggggaaatcta
gacaaactgcctccccctctggccccagttgaaaaaggaggtatctgcgcaggcaaacca
gtttcccgcactccttccagtacgtctcttccatttccacctccctctttacctgtggat
ggtctaaaggcagcagttactacactatcaccccatgcagttatccacaccacacatagt
gcaactgagccactgtcccttggcctcacgtccacaaacttctaccatgcccatcagcca
attattgggtacattgcaggtgcagggcagccacagtcttttagttaccacaccagcctg
cctccacacctgcttatcccaggaacccagcctgttattatcccggtaagtggagcagaa
gctcccgccacgtctacagcaccaactttcgctgcagcactgccccatgcatttgtgacc
tcagcagcacccaaaggcgagtcctttgagacaccagcctcctacccccacccgacaggt
gctgtggttcaggcccaactgcacttgcctatcctgccgacttgtgctagcctgccagct
actccgcctattccttccactccttctctaccaccctattttaccaagggttccatcatt
caactagctgatggggagttgaaacgcgtagaggacctaaaaacagaggacttccttcag
agtgcagaaatcagcagtgaattgaagattgactctagtactgtggagcgcatcgacagc
agccatacacctaactctgctattatccaatttgcagtgggagagcatcgttcacaggtg
aacgtggaggtgctggtggagtaccctttctttgtgttcggtcagggctggtcatcttgc
tgtccggaccggaccactcagctgttggaactgccttgcgctcggctagcggtgggcgat
gtttgcatttccctcactctcaagaacttgaaaaatggctctttaaaaaagaaccagggg
cagatttcagatgctaccagtctcgggccacctcttaaaccaccttttaaagcaccctca
ggagtgacacgcagggcagcacggcacacagagcaggagaatggactggcccagtgtggc
agacagggaggtgtgagctcccagacaagcaaagaaaatggagaactaggtgtctgtgag
aaaggagcctggaaaatcccactatcctcagaatctatcagtaaacctgcaggccgaaag
cggagatggtcagccccagaaggtcgtaaagtcgagaagcctgaagaggaaccgccctca
actcttcccaggtcttcatttatctctcaggaggtcaaaatcagcattgaaggcagatcg
aatattggcaaatga
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