KEGG   Silurus meridionalis (southern catfish): 124376009
Entry
124376009         CDS       T08004                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04514  Cell adhesion molecules
smeo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124376009 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124376009 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:smeo00535]
    124376009 (sdc3)
Proteoglycans [BR:smeo00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   124376009 (sdc3)
SSDB
Motif
Pfam: Syndecan PRP38_assoc DUF1275 TGF_beta_GS
Other DBs
NCBI-GeneID: 124376009
NCBI-ProteinID: XP_046690824
LinkDB
Position
22:complement(11126014..11155986)
AA seq 444 aa
MKLPGWMAVALLLAHSVSAQRRSLQLVDQENSGDGFFDDEDYSSGSGSGYPAFEIDATEL
GIPLTTKEPLPQSTTQATGPAPSAPPAAEPSSPPAPEIERESGMDSDRELEMEKKRAHQI
EHEQEMREREREREREREREREREREREREREREREREREREREREREREHERERERVRS
TIAPRIPFVSKMTTDSFMIVDKTPIPTEDTESLGTTEDEDGMFISTETYPFDSLSTELIK
VGITNTEEAPNIIATTMAMPITTPATPSTAPPRSRKPQQIPSITPPRPRKPQTTPSLATP
TETTHRVPASTVQVKTTDSDINNEVAVAGPSGDSEIRDEEGRGGNEVGHGKGASDVGAEP
DLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGS
YTLEEPKQATVTYQKPDKQEEFYA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaagctgcctggctggatggctgtggcgctgctgcttgcgcactcggtgtcggcacag
cgtcgatcattacagctagtagatcaggagaactctggagatggcttctttgatgatgag
gactattcctctggttcaggctcaggctacccagcgtttgagatagatgccactgaactg
ggtatacctttaaccacaaaagagcccctgccacaatcaaccacacaggccactgggcca
gccccttcagccccacccgctgcagaacctagcagccccccggcaccagaaatagagagg
gagagtggtatggatagtgatagagaactggagatggagaaaaagagagcccatcagatt
gagcacgaacaggaaatgcgggaaagagagagagagcgtgagagggaaagagaacgagag
agggaaagggagagagagagggagagagaaagagagagggaacgagaacgtgaaagggaa
cgtgaaagagaacgtgaaagagaacgtgaacatgaaagagagagagagagggtaagaagt
acaattgcacccagaataccatttgtttcaaaaatgaccacagactcttttatgattgtg
gataagacccccatccccactgaggatacggagagccttggcaccacagaagatgaggat
ggtatgttcatttccacggaaacctatccctttgactcactcagtacagagctcatcaaa
gttggcatcacaaacactgaagaggctcccaacattattgctaccactatggctatgcca
attacgactcctgccacacccagcactgcccctccgcgatcacgcaaacctcaacagatt
cccagtatcactcctccacgaccacggaaacctcaaaccacgcccagcctagctacaccc
actgaaactacacaccgcgtgccagcctctacagtgcaggtaaaaacaacagattcagac
ataaataatgaagttgcagttgcaggtcccagtggggactctgagatccgagacgaggaa
ggacgaggaggtaatgaagtggggcatggcaaaggtgcatcggacgtcggggcagagcct
gatttgactggcaacacaatagatacaggaagttcagctgcccagcttcctcaaaaaaac
atcttggaaagaaaagaagttttgatagcggtgattgtgggaggtgtagttggtgcactc
tttgctgcattcctggtaatgttacttgtatatcggatgaaaaagaaggatgaaggcagc
tacacgctggaggaacccaaacaagctacagttacttatcagaaaccagacaagcaggag
gaattctatgcctaa

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