Silurus meridionalis (southern catfish): 124376009
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Entry
124376009 CDS
T08004
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124376009 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124376009 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124376009 (sdc3)
Proteoglycans [BR:
smeo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
124376009 (sdc3)
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GFIT
Motif
Pfam:
Syndecan
PRP38_assoc
DUF1275
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
124376009
NCBI-ProteinID:
XP_046690824
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Position
22:complement(11126014..11155986)
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AA seq
444 aa
AA seq
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MKLPGWMAVALLLAHSVSAQRRSLQLVDQENSGDGFFDDEDYSSGSGSGYPAFEIDATEL
GIPLTTKEPLPQSTTQATGPAPSAPPAAEPSSPPAPEIERESGMDSDRELEMEKKRAHQI
EHEQEMREREREREREREREREREREREREREREREREREREREREREREHERERERVRS
TIAPRIPFVSKMTTDSFMIVDKTPIPTEDTESLGTTEDEDGMFISTETYPFDSLSTELIK
VGITNTEEAPNIIATTMAMPITTPATPSTAPPRSRKPQQIPSITPPRPRKPQTTPSLATP
TETTHRVPASTVQVKTTDSDINNEVAVAGPSGDSEIRDEEGRGGNEVGHGKGASDVGAEP
DLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGS
YTLEEPKQATVTYQKPDKQEEFYA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcctggctggatggctgtggcgctgctgcttgcgcactcggtgtcggcacag
cgtcgatcattacagctagtagatcaggagaactctggagatggcttctttgatgatgag
gactattcctctggttcaggctcaggctacccagcgtttgagatagatgccactgaactg
ggtatacctttaaccacaaaagagcccctgccacaatcaaccacacaggccactgggcca
gccccttcagccccacccgctgcagaacctagcagccccccggcaccagaaatagagagg
gagagtggtatggatagtgatagagaactggagatggagaaaaagagagcccatcagatt
gagcacgaacaggaaatgcgggaaagagagagagagcgtgagagggaaagagaacgagag
agggaaagggagagagagagggagagagaaagagagagggaacgagaacgtgaaagggaa
cgtgaaagagaacgtgaaagagaacgtgaacatgaaagagagagagagagggtaagaagt
acaattgcacccagaataccatttgtttcaaaaatgaccacagactcttttatgattgtg
gataagacccccatccccactgaggatacggagagccttggcaccacagaagatgaggat
ggtatgttcatttccacggaaacctatccctttgactcactcagtacagagctcatcaaa
gttggcatcacaaacactgaagaggctcccaacattattgctaccactatggctatgcca
attacgactcctgccacacccagcactgcccctccgcgatcacgcaaacctcaacagatt
cccagtatcactcctccacgaccacggaaacctcaaaccacgcccagcctagctacaccc
actgaaactacacaccgcgtgccagcctctacagtgcaggtaaaaacaacagattcagac
ataaataatgaagttgcagttgcaggtcccagtggggactctgagatccgagacgaggaa
ggacgaggaggtaatgaagtggggcatggcaaaggtgcatcggacgtcggggcagagcct
gatttgactggcaacacaatagatacaggaagttcagctgcccagcttcctcaaaaaaac
atcttggaaagaaaagaagttttgatagcggtgattgtgggaggtgtagttggtgcactc
tttgctgcattcctggtaatgttacttgtatatcggatgaaaaagaaggatgaaggcagc
tacacgctggaggaacccaaacaagctacagttacttatcagaaaccagacaagcaggag
gaattctatgcctaa
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