Silurus meridionalis (southern catfish): 124376115
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Entry
124376115 CDS
T08004
Symbol
itgb8
Name
(RefSeq) integrin beta-8 isoform X1
KO
K06591
integrin beta 8
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
smeo04514
Cell adhesion molecules
smeo04810
Regulation of actin cytoskeleton
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124376115 (itgb8)
04514 Cell adhesion molecules
124376115 (itgb8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124376115 (itgb8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124376115 (itgb8)
04810 Regulation of actin cytoskeleton
124376115 (itgb8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124376115 (itgb8)
04515 Cell adhesion molecules [BR:
smeo04515
]
124376115 (itgb8)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124376115 (itgb8)
Cell adhesion molecules [BR:
smeo04515
]
Integrins
Integrin beta subunits
124376115 (itgb8)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
EGF_2
EGF_TEN
EGF_Teneurin
I-EGF_1
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
124376115
NCBI-ProteinID:
XP_046690998
LinkDB
All DBs
Position
22:complement(17038912..17065458)
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AA seq
794 aa
AA seq
DB search
MSPGLLQHCNLVLRTAVLVSLVAFASSHSADNKCGSPLAMTCQECLSRGPDCAWCFQKSF
LDGVPSSKRCDSVAQLMLKGCREEFIENPGVQVELNMKLSSSQVSPQDISIQLLPGSEAS
FTVEVTQLELYPVDLYYLVDVSASMQDNLDQLKTVGVNLSHRMKEHSSDFQVGFGSFVDK
PVSPYIDVHPSKISNPCRDYEVNCRPAHGFIHVLPITDNMTEFKHVIQQQRISGNMDTPE
GGFDAMLQAAVCQKDIGWRPEAKHLLLVMTDQPSHLALDSKLAGIVVPHDGHCHLKDGTY
SQSAHMEHPTIGKLAEKLLENSIYSVFAVNEMQYKWYEDLVPLLPGTFLGRLLPKASNLT
DLVVDAYKKLLSDVGVEIEIKDSEAHRFWVSVTAVCPNGSTAAGSTKCTNVQPKQKVFFN
ITVGMRACPEKYDSPQKENGPEVMLVVKPVGFNESTTVRVRQACACSCGGAGPCHDNPET
SLCVSGDAPADEGDERSLMDSCRDVKTGLMCSGRGTCVCGACVCDPSNLGTIYGKFCEMD
DFSCPNERGIMCAGHGQCVSGECSCQPSWTGESCGCRSSTESCLSADGLVCSGHGKCVCG
KCVCDHLRRFGPFCEKCTTCSNSCQSHWSCVDCHLSKGFAANDSLQCNRSCTSLVVYVDD
ISELTRGKHCLYHTREQCVFKFHVDMASHQPQLRISRHADCVSSYRYFQTFLSVFLLTVV
LGLGILAVMRLLLRGRNRSLRGHVIEQFDDSNKILSYVPTPNEKTITYRRDGLPEHPMEM
HVHVHKMPLHDIYP
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccggtttgcttcaacactgtaacctggttctccgcaccgccgtgctcgtttcc
ctggtcgccttcgcatcctctcactcggctgataataagtgtggatcaccacttgccatg
acgtgtcaagaatgcctgagccgtggaccagattgcgcctggtgctttcagaagagcttc
ctagatggagtacccagtagtaagaggtgtgattctgttgctcagcttatgcttaaagga
tgcagggaggaatttattgagaatcctggagttcaagtggagctaaacatgaaactaagc
agctcacaggtgtctcctcaagacatctccatccaattgctgccaggcagtgaggcaagc
ttcaccgtggaagtgacgcagttggagttgtatccagtagacctgtactacctggtggat
gtctcagcctccatgcaggataacttggaccagctgaagactgtcggtgtgaacctttcc
caccgtatgaaagaacattccagcgatttccaagtgggtttcggatcgtttgtggacaag
ccagtttctccctatattgatgtgcatccttcgaaaatcagtaacccttgcagagattat
gaggtcaattgccggccagcccacggcttcatccatgtcctgcccatcaccgacaacatg
acagagttcaagcatgtcattcagcagcagaggatctccgggaacatggatacaccagag
ggaggctttgacgccatgctgcaagcagctgtgtgtcagaaagacattggctggagacct
gaggctaagcaccttctgctggtcatgaccgatcagccgtctcatcttgcactggatagc
aaactggcgggcatcgtggtgccccacgacgggcactgccacctaaaagatggcacttat
tcccagtctgcccacatggagcatccaaccatcgggaagctggcagagaagcttctagaa
aacagtatttactccgtttttgctgtgaatgagatgcagtataagtggtatgaggatttg
gtgcctttgcttccaggtactttcctgggcaggttacttcccaaagcctctaatcttaca
gacctagtagtggatgcatataagaaactcctatcggatgtcggagtggagatagaaatc
aaggacagcgaagctcacagattctgggtcagtgtaacagcagtgtgcccaaacggatcc
actgcagctggaagcactaaatgcaccaatgttcaacccaagcaaaaagttttcttcaac
atcacagtgggaatgcgtgcatgcccagaaaagtatgattcaccgcagaaagaaaatggg
cctgaggttatgctggttgtgaaacctgtgggatttaacgaatccacgactgtgcgagtg
agacaggcctgtgcatgtagctgtggtggggcaggaccttgccatgacaacccggaaact
tccctctgtgtttctggagacgctccagccgacgagggagacgaaaggagtttgatggac
agttgccgagatgtaaagacaggcctgatgtgcagcggcaggggaacctgtgtctgtggg
gcatgtgtgtgtgacccgagtaaccttggcaccatctacggaaagttctgtgagatggat
gacttctcctgtcccaatgaaagggggataatgtgtgcaggacatggccagtgcgtctca
ggggagtgctcatgtcagcccagctggactggtgagagttgcggatgccgcagctccacg
gaaagctgtttgtcggctgatggcttggtgtgcagtggccacggaaagtgtgtctgtggc
aagtgtgtatgcgatcacctccgacgtttcggccccttttgtgagaagtgtaccacctgc
tcgaactcctgtcaatcacactggagctgtgtggactgtcacctgtctaaaggctttgca
gcaaacgattctctgcaatgcaacagaagctgcacttcactggtggtctatgttgatgac
atttcggagctgaccagagggaagcactgtctgtaccacaccagggagcagtgtgtcttc
aagtttcatgtggacatggcatcacatcaaccacagctacgaattagccggcatgcggat
tgcgtgtccagctaccggtactttcaaaccttcctcagtgttttcctcctcaccgtggtt
ctgggtctgggaatcctggctgtaatgcgtttgctgctccgcgggaggaacaggtcactg
aggggacacgtcatcgagcagttcgatgacagcaacaagatcctgtcgtacgtgccgacc
cccaacgagaagacgataacctacagacgcgatggtctccccgagcacccaatggagatg
cacgttcacgttcacaaaatgcccctgcatgacatctatccatga
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