Silurus meridionalis (southern catfish): 124376118
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Entry
124376118 CDS
T08004
Name
(RefSeq) junction plakoglobin-like isoform X1
KO
K10056
junction plakoglobin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04382
Cornified envelope formation
smeo04519
Cadherin signaling
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
124376118
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124376118
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124376118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124376118
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124376118
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
WRM1_C
BAR1_C
ARM_PUB
Cnd1
TPR_CCP1_N
ELMO_ARM
V-ATPase_H_N
Adaptin_N
HEAT_EZ
HEAT_2
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
124376118
NCBI-ProteinID:
XP_046691007
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All DBs
Position
22:complement(274575..305500)
Genome browser
AA seq
723 aa
AA seq
DB search
MSMPISEVEVKVAEWQKTYYAADSGIQSGATTVNDEDQSELSSKTFTVEDCSADFDTQLV
LTRTQRVRAAMFPETSAERETLARSDSQSNVQRLTEPSHLLNNAIVHLINYQDDAELAKR
AVPELIKLLTDDDQVVVRKAALIVSRLVRNDASRHVMMQSAVMMSAVLQAMQSSSDMETI
RCMASILHCLSHHHQGLDAIFTAGGIPALIHMLSSPVEAVLFYSITTLHNLLLHQDGSKM
AVRMCEGLQKIVPLLKHTNPKFLAITTDCLQILSYANQESKLIILASGGPESLVSIMRNY
NYEKLLWTTSRVLKVLSVCPSNKPAIVNAGGMQALSLHLTGFSARLIQNCLWTLRNLSDA
ATKQENLDSLLHVLVTQLGSDDVNILTCATGILSNLTCNNARNKSLVVQRGGVEALINAL
LRTTVNQDEAELAVCAAVNQDVAEPAVCALRHLTSRQPLAQTAQNEVRVHYGIPVVVKLL
GQPHYWPVVKAIVGLIRNLALCPANQAPLREAGAIPRLVNLLLKAHQDLQRLSTKNTYQD
GVSMEEIVEGCTGALHILARDPINRSEISSMQTIPLFVQLLYSCVESVRRVSAGVLCELA
LDKNSAELIDAEGASAPLMELLHSSNEGIATYAAAVLFRISEDKNSDYRKRVSVELTHSL
FKHDTHAWDMAHSALTLDHGYMQDEGVSSLYVYCVSVEGVSSLYVYCVFVEGVSSLYVYS
VSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgccgataagtgaagtggaggtaaaggttgctgaatggcagaagacatattat
gcagctgactctggcatccaatcaggagccacaaccgtaaatgatgaggaccaatcagag
ctcagctccaaaacctttactgtggaggactgtagtgcagactttgatacgcagctggtt
ctgacccgaactcagcgtgtccgagcggccatgtttccggagacatcagcagagcgtgag
acattagcaaggagtgactcgcagtctaatgttcagcgtctgactgaaccctctcacctc
ttgaacaatgccattgttcacctgatcaactaccaggatgatgctgagctcgccaaacga
gccgtgcccgagctcatcaaactgctgacggacgatgaccaggtggtggtgaggaaggcg
gctctgatcgtgagccgcctggtccgtaatgatgcgtctcgccatgtgatgatgcagtca
gcggtgatgatgtcagcagtgctgcaggcgatgcagagctcgagtgacatggaaacgatt
cgctgcatggcaagcatcctgcactgcctatcacaccaccaccagggcctggacgccatc
ttcacagctggaggaattcccgctctcatccacatgctcagttctccagtggaagcagtg
ttattttactccatcactacactccataacctcctgctccaccaagatggctccaaaatg
gcagtgcgaatgtgtgaaggtctgcagaagattgttcctctgcttaaacacacaaaccca
aagttcctcgccatcaccaccgactgcctgcagatcctctcctatgccaaccaggagagt
aagcttataattttggcgagtggaggtcctgagagtttagtgtccatcatgaggaactat
aactatgagaagttgttgtggacaaccagcagagtgctgaaggtgctgtcagtgtgtccc
agcaacaaacctgccattgtcaatgcaggaggcatgcaggctctttctctgcacctgact
ggtttcagtgctcgtctcattcagaactgtctctggactctgaggaacctgagtgatgct
gccaccaaacaggaaaatctggattctcttctccacgtcctggtgactcagcttggttcg
gatgacgttaacatcctgacgtgtgctacaggaatcctttcaaatttgacgtgtaataat
gcacggaataagtcgttggtggtgcagcgtggtggtgtggaggcacttattaatgctctt
ctgcgaaccacggtgaatcaggacgaggcagagctggctgtatgtgctgcggtgaatcag
gatgtggctgagccggccgtatgcgccctacgccacctcaccagccgccagccgctcgcc
cagaccgcgcagaacgaagtgcgagtccactacggcatccccgtcgtcgttaagctcctg
ggacagccacattactggcctgtcgtcaaggccatcgttggtctgatccgtaacttggcg
ctctgtccagctaatcaggcaccactaagggaggcaggcgcaataccacggttggttaac
cttttgctgaaggctcatcaggacctacagcgactcagcacaaaaaacacctaccaggat
ggagttagtatggaggaaatagttgaaggctgcacaggagctttacacattttggcgagg
gatccgattaaccggagtgaaatctccagcatgcagaccatccctctgtttgtacagttg
ttatactcgtgtgttgagagcgtgcggcgcgtctcagcaggagttttatgtgaacttgct
ctggataagaactcggctgaactcattgatgctgaaggagcttctgccccattaatggag
cttctgcactcttctaacgaaggcatagccacctatgctgcagcagtgctcttcagaatc
tcagaggacaaaaactctgactacaggaagagagtatcagtggagctcacacactcactg
tttaagcacgacacacacgcctgggacatggcacacagcgcattgaccctcgatcatgga
tacatgcaggatgagggcgtgtcctctctgtatgtttactgtgtctctgtagagggcgtg
tcctctctgtatgtttactgtgtctttgtagagggcgtgtcctctctgtatgtttactcc
gtgtctctgtag
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