Silurus meridionalis (southern catfish): 124376128
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Entry
124376128 CDS
T08004
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124376128 (zgc:91944)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124376128 (zgc:91944)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
Motif
Other DBs
NCBI-GeneID:
124376128
NCBI-ProteinID:
XP_046691017
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Position
22:14256134..14273956
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AA seq
478 aa
AA seq
DB search
MSAASIALEYICMWQRVRGQALVREWRAEPDETSDARMECCDVEPRYTIEQIDLLQRLRL
SGLTKPQILQALESLERLDPEHRSPFCDNHSAPPRAPTSAAPAAPSSSSSSSSSLTSATT
QTPVLDAALSPSNSYDASSPPLYPPGGVQRAFAYDLAEEDWDLEEKVEEYMRRDSNLVKE
EIKAFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGFR
WTENQHAQGNRSRTDTPWSRQRELLMHLLPWYSAQQAQSGATLSMRSLVKEEPDWRVAGC
PGDRVAVGGPFRLRRGSRFTWRKECQSIMESFFIENQYPDEARREEIANACNSVIQKPGC
KLSEFERVTALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNGEEVENQEFG
DQVVNQRFPDQEELAQRKANEPDGATLPAVEVVPLSSPATQHVDQKMDESKREAADEE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgccagcattgctttagagtatatatgtatgtggcagagggtgcgtggacag
gcgctggttcgcgagtggagggcggagccggacgaaacgagcgatgccaggatggagtgc
tgtgatgtggagccacgctacaccatcgagcagatcgacctgcttcagcgcctcaggctg
tccggcttaaccaaacctcagatcctccaggctctggagtctctagagcgattggatccg
gagcaccgctcgcctttctgtgacaatcactcagccccgcccagggctcctacctctgca
gctccggctgcaccttcttcctcatcctcttcatcttcctctctcacctcagctaccaca
cagactccagttctcgatgccgcactgtcccccagcaacagttacgacgcctcgtctcca
cccctgtatccaccgggtggagttcagagggcgttcgcttatgacctagcagaagaagac
tgggatctggaagagaaggtggaggagtacatgaggagggacagtaacctggtaaaagag
gaaatcaaggccttcctcaataacaggaggatctctcaggctattgtcggccaagttaca
ggtatcagtcaaagctacatctcccagtggctgctgcagcagggcctggagatgagcgat
tccaagcgcagggctttttaccgctggtatctgctggagcggaacagtccagggttcaga
tggactgaaaaccagcatgctcagggcaacaggagcaggactgacaccccctggagtaga
caaagagaacttctgatgcacctgctcccttggtactctgcgcagcaggcccagtcaggt
gctactctgtccatgcgctcgctggtcaaagaggaacctgactggagggttgctggctgc
cctggtgacagggtggcagtaggtgggcctttcagactgaggcggggcagccgtttcacc
tggaggaaagagtgccagtcgatcatggagagtttctttatagagaatcagtatcctgat
gaagccaggcgagaggagattgccaacgcctgcaactcggtcatccaaaaaccagggtgc
aaactttctgagtttgagagagtcactgctctgaaagtctacaactggtttgcaaatcgc
aggaaggagatgaagagacgtgccaacattgaggctgccattcttgaaagccatggcata
gaagtgccaagtcccagctgtcactctaacggtgaagaggttgagaaccaggagtttgga
gatcaggttgtaaatcagcgatttccagatcaggaagagctcgctcagagaaaagccaat
gagccagatggagccacactgcctgcagtggaagtagtgcctctttcaagccccgctact
caacacgtggatcagaagatggatgaatcaaaaagggaggccgctgatgaggaatga
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