Silurus meridionalis (southern catfish): 124376162
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Entry
124376162 CDS
T08004
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
smeo04144
Endocytosis
smeo04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124376162 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124376162 (hgs)
04145 Phagocytosis
124376162 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124376162 (hgs)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
124376162 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
UIM
CID
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
124376162
NCBI-ProteinID:
XP_046691068
LinkDB
All DBs
Position
22:complement(3686097..3698727)
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AA seq
775 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAIAAVKKKLNDKNPHV
ALYGLEVLESVVKNCGQTIHDEVASKQTMEELKDLFKKQTEPNVRNKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERVFLQAPDWVDAEECHRCRVQFGVM
TRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFEHLNNHPSLSPPSRKAEGKS
SSSSSSSSTGGGGQSELPPEYLTSPLAQQSQQMPPKRDEAALQEEEELQLAIALSQSEAE
EKERMRHKGSYPVYPKADPTPVTSSAPPVSTLYSSPVNSSAPSAEDVDPELARYLNRTYW
EKKQEEVRKSPTPSAPAPVPLAEPIPVSQPAESHAPVQPINIVEQQYQNGESEENHEQFL
KALQNAVTTFLNRMKSNHLRGRSITNDSAVLSLFQSINNMHPQLLELLNQLDEKRLYYEG
LQDKLAQVRDARAALNALRDEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQR
QLAIQRLQEQEKERQLRLEQQKHTIQMRAQMPAFSLPYAQMQSLPPNVAGGVVYPPTGPP
SYPGTFSPAGSVEGSPMHGVYMNQPGQAGGGPYQAMPASATDPNMVNAYMYQTAGTGGQP
APPGQAPPPNTSPPYTNYQPTPTQGYQNVASQAQSLPPMSQAAPTNGMTYMGYQPYSMQN
MISALPGQDPNMPPQQQYMPGQQPMYQQMAPPGGHQQQAQQHPAGSAEAQLISFD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtggaggaactttcgaaaggctgttggacaaggccaccagtcagctgctt
ctggagacagactgggagtccatcctgcagatctgtgaccttattcggcaaggagacaca
caggccaaatatgcaattgccgccgttaagaagaagctgaatgacaaaaatccacacgta
gctctctacggcctcgaggttttggagtcggtggtgaagaactgtggccagacgattcat
gatgaagtggcgagcaagcaaaccatggaggagctcaaggacctgttcaagaaacaaacc
gagccaaacgtcaggaacaagatcctgtaccttatccaggcctgggctcacgccttccgc
aacgaacccaagtacaaagtggtccaagacacctaccagatcatgaaggttgaaggtcac
gtgttcccggagtttaaagagagcgacgccatgtttgctgctgaaagggtgtttttacag
gcccccgattgggtggatgccgaggagtgccacaggtgcagagttcagttcggagtgatg
acccgcaagcaccactgccgagcatgtggacagatcttctgtggcaagtgctcctccaaa
tactccacgatcccaaagtttggcattgagaaagaggttcgagtgtgtgagccctgcttt
gagcaccttaacaaccacccctccctgtctcccccttctaggaaagcagaagggaagagc
agcagcagtagcagcagcagcagcaccggcggcggcggccagtccgagcttcctcccgag
tacctgaccagccctctggcccagcagtctcagcagatgccccctaagagagatgaagca
gcactgcaagaggaagaggagctgcagctggccattgctctgtctcagagtgaagctgag
gagaaggagagaatgaggcacaagggctcgtaccccgtgtaccccaaagccgacccaacc
ccagtgacctcctccgctccacccgtcagcactctttactcttctcctgtgaattcctcc
gctccttcagctgaagatgttgatcctgagctggcccgctatctgaacaggacttactgg
gagaaaaagcaggaggaagtgcgcaagagtcccaccccgtctgctcctgcaccggtgcca
ttggctgaaccgattccagtcagccagccagcagaaagccatgcccctgttcagcccatc
aacatagtagagcagcagtaccagaacggagagtccgaggagaaccacgagcagttcctc
aaagcgctgcagaatgcagtcaccaccttcctgaaccgcatgaagagcaaccacttgcgc
gggcgcagtatcacaaacgacagcgccgtgctctcgctcttccagtccatcaacaacatg
cacccgcagctgctggagctccttaaccaactcgacgagaagagactgtactatgaaggg
ctgcaggataagctggcgcaggttcgggatgcacgggccgctctgaacgctctgagggac
gagcaccgcgagaaactgcgccgtgccgcagaggaggcagagaggcagaggcagatccag
ctcgctcagaaactcgagataatgaggcagaagaaacaggagtatctggagatgcagaga
cagctggccattcagcgtctgcaggagcaggagaaggagcggcagctgcgcctggaacag
cagaaacacaccatccagatgcgtgcgcaaatgcctgccttttccctgccttatgcccag
atgcagtcgctgccgcctaacgtggcaggaggggtggtgtatccacccaccggacccccc
agttaccccggcacattcagccctgctggatcagtggaaggctctcccatgcacggggtc
tacatgaaccaacccgggcaagcaggaggaggaccataccaagccatgccggcatcagct
acagatcccaacatggtaaacgcctacatgtatcaaaccgcgggaacgggtgggcaacct
gccccccctggtcaggctccgcctcctaacaccagccctccgtacactaactatcagccc
actccgacacagggctaccagaatgtggcatctcaagcccagagtttgcccccgatgtcc
caggctgccccaaccaacggcatgacctacatgggttaccagccttacagcatgcagaac
atgatatcagcacttcctggacaggaccccaacatgcctccgcagcagcagtacatgcct
ggccaacaacccatgtaccagcagatggcgccccctggaggtcatcagcagcaggcacag
cagcaccccgcaggcagcgcagaggctcaacttatctccttcgactaa
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