Silurus meridionalis (southern catfish): 124376206
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Entry
124376206 CDS
T08004
Name
(RefSeq) interferon a3-like isoform X1
KO
K05414
interferon alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04217
Necroptosis
smeo04620
Toll-like receptor signaling pathway
smeo04621
NOD-like receptor signaling pathway
smeo04622
RIG-I-like receptor signaling pathway
smeo04623
Cytosolic DNA-sensing pathway
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124376206
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124376206
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124376206
04621 NOD-like receptor signaling pathway
124376206
04622 RIG-I-like receptor signaling pathway
124376206
04623 Cytosolic DNA-sensing pathway
124376206
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124376206
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124376206
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Interferons
124376206
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF4446
Motif
Other DBs
NCBI-GeneID:
124376206
NCBI-ProteinID:
XP_046691142
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Position
22:complement(1800134..1804199)
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AA seq
193 aa
AA seq
DB search
MKLVQPWTCFYSLLVFFLVQERCDTCEWMISQYRMKNGVCLSLLREMGGEITTFNKPVSF
PHLVYNAVERAKAEDQMSFLAEATEQIIVLFDAASNADNINWDSRALDDFLNILNTRQLM
ELKKCTATYAERTRHSNSERKIRRHFKRLKKMLKNANYSPDALEQIRNTVQLHLMRMDII
GADVRQKLMKRTN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtgcagccgtggacgtgtttttattctttgctggtgtttttcctcgtgcag
gagcgatgcgacacctgcgagtggatgatcagccagtaccggatgaagaacggagtgtgt
ctctcactgctccgagaaatgggtggagagattactacattcaataaaccggtttcattt
ccacacctggtgtacaacgcagtggagagggcaaaggcagaagatcagatgagctttctg
gctgaggccacagagcagatcatcgttctcttcgatgctgcatcaaatgctgataatatt
aattgggacagcagggcactggatgatttcctgaacatcctcaatacccggcaactgatg
gagcttaaaaaatgtacagcaacatacgctgagagaacaagacactcgaacagtgagagg
aaaatccgaagacacttcaagaggttgaagaaaatgctgaaaaatgctaactacagccca
gatgctttggagcaaatcaggaacacggtgcagcttcatcttatgaggatggacatcatc
ggtgcggatgtgaggcagaaactaatgaagaggaccaactaa
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