Silurus meridionalis (southern catfish): 124376319
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Entry
124376319 CDS
T08004
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124376319 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124376319 (abcb10)
Transporters [BR:
smeo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
124376319 (abcb10)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
DUF87
AAA_29
AAA_21
AAA_25
AAA
RsgA_GTPase
AAA_33
nSTAND_NTPase5
nSTAND3
AAA_14
P-loop_TraG
APS_kinase
Motif
Other DBs
NCBI-GeneID:
124376319
NCBI-ProteinID:
XP_046691296
LinkDB
All DBs
Position
2:13956826..13965776
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AA seq
705 aa
AA seq
DB search
MSAVTMLQMSRFATRKLLQQWNFNCKRPVRLNQLSGLTSMRSHRKSVCKTVLEGSLFSHV
RLGETLGPHCVWKHFRASPSFTFYSTSTNSKGQVAEHAGTKVKTNDKPKKISTDDFKKLL
ELAYPERRRLTAAMSFLIVSSAVTMSAPFFLGKVIDTVYTNSSADFSASLTSLCIMLAGV
FLCGGAANAARVYLIQVSGEQIVRNLRASLFSSILRQEVGFFDKTRTGELINRLSSDTGR
VGSVLTDNMSDGLRAVAQAGAGVSMMFYVSPSLATFVLMIVPPMAGLAVIYGRYVRSISK
QTQDALAQATQLAEERISNLRTVRAFGKELTEVQAYSEKVDDVFKLAKKEAVLTSGFYGV
TGLSGNMIILSVLYKGGLLMGGEHMTVGELSAFLMYAFWVGISIAGLSSFYSELMKGFGA
GTRVWELMERKPEFPLNEGLVLRPEQLKGALEFHNVSFAYPTRKDVPIFRNLNLSLPAGS
VIAVVGSSGSGKSTLVSLLLRLYDPDSGMVTVDGHDIRNLNAYWLRSHIGTVSQEPVLFS
CSIAENIAYGAIDPSQVTSEDIVRAAQIANAHDFINGFPKGFDTVVGEKGVLLSGGQKQR
IAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMQERTVLVIAHRLSTIQNADAV
AVLDQQHIVECGRHAQLLTNQNGLFRKLMEKQAFLNADQKLALAK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtaacaatgttgcagatgtcgagattcgctaccaggaaactgttacagcag
tggaacttcaactgcaaacgtcctgtaagacttaaccagctatctggtctgacctccatg
agatctcatagaaaatctgtctgtaaaactgtacttgaaggatcccttttttctcacgtc
cgactgggagaaactttaggtccgcattgtgtttggaaacacttcagggcctccccttca
tttactttttacagcacgtccacaaactccaaggggcaagtagcagagcatgctggaact
aaagtcaagacaaacgacaaaccgaaaaagatatccacagatgacttcaagaagttatta
gagcttgcttatccagagcgccggaggcttacagctgctatgagcttcttgattgtctcc
agtgctgtcaccatgtctgctccatttttcctgggtaaagtgatcgacactgtgtacaca
aactcatctgcagactttagtgcctccctgacctccctgtgcatcatgctggcaggggtt
ttcctgtgtggtggtgctgccaatgctgcacgtgtataccttattcaggtctcaggggag
cagattgtgagaaacttacgtgcatcccttttttcctcgattttgaggcaggaggtggga
ttctttgataagactcgcactggtgagctcatcaatcgcctttcatcagacactggacga
gttggaagtgtgctcacggacaacatgtctgatggtctacgggcagttgctcaggctgga
gctggagttagcatgatgttctatgtgtcacccagtcttgccacctttgttctaatgatt
gtacctcctatggcgggcttggcagtcatctatggaagatacgtgcgctccatatctaaa
caaacacaggatgcgctggcacaggctacacagctggcagaagagaggatcagtaattta
cggacagttagagcatttggtaaagagctgacagaagtgcaggcctactcagaaaaggtg
gatgatgttttcaaactggctaagaaggaagcagttcttacttctgggttctatggagtg
actggcctgagtggtaacatgattatcctgagtgtgctgtataaaggtgggctactgatg
ggtggtgagcacatgacagttggagagctctccgcctttcttatgtatgccttttgggtg
ggcattagcattgctggcctgagctcattctattcagagctaatgaaggggtttggagct
ggcacacgtgtgtgggaactgatggagcggaaaccagaatttcctctcaatgagggactt
gtactgagaccagagcaactgaagggagctctcgagttccataatgtgtcatttgcttac
ccaacaaggaaggatgtccctatcttccggaacttgaatctctctttgccagctggttca
gtaatcgcagttgtggggtcaagtggctctggaaaatctacacttgtgtctcttttgctt
cgactgtatgatccagactcaggtatggtaactgttgatggccatgacatccggaatttg
aatgcctattggctgcggagtcatattggaactgtaagccaggagccagtcctcttctca
tgctcaattgctgagaacattgcctatggagcaatagatcccagtcaggtcacatcagag
gacattgttcgagctgcacagattgctaatgctcatgacttcattaatggattccccaaa
ggctttgacactgttgttggagagaaaggagtactactgtcaggtggacagaaacaaaga
attgctattgcaagggccttgcttaagaaccccaaaatactgttactcgacgaagccaca
agtgctctggatgcagagaatgagttcctggtgcaagaggctctggagcggttgatgcag
gaacgtacagtgcttgtcattgctcaccgactctccaccatccagaatgcagatgctgta
gctgtgttggaccagcaacacatagtagagtgtggtcgtcatgcccaacttcttaccaac
caaaatggtctcttccgcaagctcatggagaaacaagcctttttaaatgctgaccagaaa
ttggctcttgccaaatag
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