Silurus meridionalis (southern catfish): 124376327
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Entry
124376327 CDS
T08004
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124376327 (samd1a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
124376327 (samd1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
124376327
NCBI-ProteinID:
XP_046691320
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All DBs
Position
22:complement(3404486..3415062)
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AA seq
406 aa
AA seq
DB search
MSEPRYREWILDTIDSLRSRKARPDLERICRMVRRRHGSEPDRTCLELERLIREHAVLKV
NYKGSVSYRNAAKVHRGRRRSSEQAAAKKSFSSSTSSSSSSSSSSCSSGKERASPAELQY
SDSAQGPADHDPMEDMEDEFSTTACMDSSMDEEDASLDAPCMQIQSSADSGISMSPVVTD
AEAEMTSSSLTPSKSPSSCQSTPEKDRDAARVSPEITPSTAQHDTGSPELEAVLQPAAIC
PSAQRSALMREEEEEPRAGENALTPDQLLSEHTASPRPDEAVGSDHLLEGKKCTNVEDVI
IHSQGTETANNGGMKKQGLFKEEDMAQDLLLWSVADVASYFTSAGFPEQAVAFRTQEIDG
KSLLLMQRSDVLTGLSIRLGPALKIYEHHVKALQKSHFQEHSSVFS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagccgcggtaccgcgagtggatcctggacactattgactcgctgcggtcgagg
aaagcgagaccggacctggagcgaatctgccggatggtccgcaggagacacggctctgag
ccggaccggacatgcttggagctggagagactgatccgggagcacgccgtgctcaaagtc
aactacaagggctcggtgtcctaccgcaacgcggccaaagtgcaccgaggcaggcggagg
agcagcgagcaggcggccgctaagaagtcattctccagttctacttcatcttcgtcatca
tcatcatcatcatcgtgctcctcgggtaaagagcgagcttcaccagcggagctgcagtac
agcgacagcgcgcagggtcccgctgaccacgacccgatggaggacatggaagatgagttc
tccactacggcctgcatggacagcagcatggacgaggaggacgccagtctggacgctccc
tgcatgcagatacagagctccgctgactccggcatcagcatgagtcctgtggtcacagac
gctgaggccgagatgaccagttcctcgctcacgccctcaaagagcccctcgtcctgccag
agcaccccggagaaggaccgcgacgccgctcgagtttcccccgaaatcaccccgagcacg
gctcagcatgacacgggctccccagagctggaagcagtgctgcagccggcagccatctgt
ccctcggcccagcggagtgcactgatgagggaggaggaggaggagccgagagctggagag
aacgctctcactcctgaccagctgctgtctgagcacacggcctcaccgcgcccagacgag
gcggtgggatcggaccacctgctggagggcaagaagtgcactaacgtagaagacgtaatc
attcactcacaaggaaccgaaacggccaacaacggagggatgaagaaacaagggttgttt
aaagaagaggacatggcacaggacctcttactgtggagtgtggcggatgtggcgagctac
ttcacatctgcagggtttcctgagcaggctgtggctttcagaacgcaggaaatcgacgga
aagtccctgctcctgatgcagcgcagcgacgtgttgacaggcctgtcgatccgactcggc
cccgccctcaagatatatgagcatcatgtcaaggcgctgcagaagagccactttcaggag
cacagcagcgttttctcttaa
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