Silurus meridionalis (southern catfish): 124376337
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Entry
124376337 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: dynamin-2-like
KO
K23484
dynamin 2 [EC:
3.6.5.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
smeo05100
Bacterial invasion of epithelial cells
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124376337
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124376337
05100 Bacterial invasion of epithelial cells
124376337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124376337
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
124376337
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
124376337
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
124376337
RhoA-dependent endocytosis
124376337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
AAA_16
PH_20
PH_11
Motif
Other DBs
NCBI-GeneID:
124376337
NCBI-ProteinID:
XP_046691338
LinkDB
All DBs
Position
22:3194184..3218941
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AA seq
740 aa
AA seq
DB search
MEPSLAEPNPARIMGTLGMEELIPLINRLQDVFSSTGRCCSFDLPQIAVVGEQSSGKSSV
LENLVVRDFLPRGSGIVTXRPLVLQLINNKAEYAEFLHCKGKKFVDFXEVRTEIEAETDR
ITGSNKGNLPIPINLRVYSPNVLNLTLIDLPEMTKVAVGDQLVDIEHQIRDMLLQFITND
SCLILAVTPANTDLANSDTLKIAKEVDPQGLRTIGVITKLDLMDEETDAQDILDNKLLPL
RRGYIGVVNCCQKDIDCRKDIRVTLAAERKFFLSHPAYRHMAEKMGTRHLQKTLNQQLTN
HIQDTLPGLRSKLQSQLLSLEKQLEEYKNFRPDDPTYKTKALLQMVQQFGVDFEKCFEGP
LSGGARINRIFHERFPFELNKIVFDEKELRREISHAIKNIHGVRSVLFSPDPAFKVIVKK
QIIKLKKPCLQCIDLVIQELINTVRQCSNKLNSYPRLREETERIVTTYVKEQEGKTKSQV
LLLIDIELSYINTNHDDFIGFPNDIVIRKGWLTNISFMKGGSKEYWFVLTAESLSWYKDE
EEKKKKYMLPLDNLKIRDVEKGFMSTKHTFAISSQQRNVCKDLRQFELMCGSQEEVDSWK
ASFLHVGVYPEKDQAMGDDGAPVDTFSMDPQLERQVTMIRNLVDSYISIVKKTIRDLMPK
TIMHIMINSVKDFIHSKLLAYLYSSGDQNSLMDESADQAQKRDEMLHVYHALKEALTIID
DISTTSKTAKDLLVLPPGPT
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcctagccgaaccaaacccagccagaatcatggggaccctgggaatggag
gaattgatccccctgattaacagactccaagacgtgttcagttccacagggcggtgctgc
tcctttgatctgccgcagatcgccgtggtgggagaacagagctccggaaagagctcggtt
ctggaaaatttagtcgtcagggattttctccctcgtggctcagggatcgtcactngcagg
cctctggttctgcagctaatcaacaacaaagcagagtatgctgagttcttgcactgtaaa
gggaagaagtttgtggacttcnaagaagtccggacagagatcgaggccgagacggacagg
atcacgggttcgaataaggggaatctccccattcccatcaacctgagagtctactcgcct
aacgtgttgaacctgactctcatcgacctaccagagatgaccaaggttgccgttggcgac
cagctggtggacatcgagcaccagatccgagacatgcttttgcagttcatcactaatgac
agctgtctgatcctggcagtcacaccggccaacactgacctggccaactcggacactctg
aagatagccaaggaagtggatcctcagggtctccgcaccattggtgtgatcaccaagctg
gatctgatggacgaagaaacggacgcacaagacattctggataacaaactgctcccactg
cgcagaggctacatcggtgtagtgaactgttgtcagaaagacattgattgcaggaaggac
atccgcgtcactctggctgcagagaggaagttcttcttgtctcaccccgcttacagacac
atggcagagaaaatgggaacgcggcacctgcagaagaccctcaaccagcaattgactaac
cacatccaggacacgctgcctggtttgcgcagtaagttacagtcacagctcctgtctctg
gagaaacagttggaggagtacaagaacttccgtcctgacgacccaacatacaagaccaag
gctctgctgcagatggtgcagcagtttggtgtggacttcgagaagtgtttcgagggacca
ctgtccggtggtgccaggatcaaccgcatcttccacgagcgctttcctttcgagctgaac
aagattgtgtttgatgagaaggagctgcggcgagagatcagtcacgccataaagaacatc
cacggagtcagatctgtcctgttctcccccgacccggcgttcaaagtcatcgtgaaaaag
cagatcataaagctgaaaaagccctgtctccaatgtatcgatctggtgattcaggagctc
atcaacacagtcaggcagtgctccaacaagctgaattcgtaccctcggctgagggaggag
actgagagaattgtcactacatacgtgaaagagcaagagggcaagacaaagagccaggtt
ctgttgctgatcgacatcgagctgtcatacatcaacaccaaccatgatgacttcatcgga
ttccccaacgacattgtgatccgcaaaggctggctcaccaacatcagcttcatgaaggga
ggatccaaggagtactggttcgtcctgacagctgagtctctgtcctggtacaaggatgaa
gaggaaaaaaaaaagaaatacatgctccctctggacaacctgaagatccgagacgtggag
aaaggcttcatgtctactaaacacacatttgctatcagctcacagcaaaggaacgtttgt
aaagacctgcggcagttcgagctgatgtgcggttcccaggaggaggtggacagctggaag
gcctcgttcctccatgtgggcgtgtaccctgagaaagatcaggccatgggcgatgacgga
gctccagtggacaccttctccatggaccctcagctggagaggcaggtgacaatgatccgt
aacctggtggactcctacatcagcatcgtcaagaagaccatcagagacctgatgcccaag
accatcatgcacatcatgattaacagtgtgaaggacttcatacactctaagctgctggcc
tacctgtactcttcaggagaccagaacagtctgatggatgagtcggccgatcaggctcag
aaaagggacgagatgcttcacgtgtaccatgccctcaaggaggcgctcaccatcatcgat
gacatcagcaccaccagtaagacagccaaagacctcctggtgctcccaccgggtccaaca
taa
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