KEGG   Silurus meridionalis (southern catfish): 124376353
Entry
124376353         CDS       T08004                                 
Symbol
ifnphi3
Name
(RefSeq) interferon phi 3
  KO
K05414  interferon alpha
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04060  Cytokine-cytokine receptor interaction
smeo04217  Necroptosis
smeo04620  Toll-like receptor signaling pathway
smeo04621  NOD-like receptor signaling pathway
smeo04622  RIG-I-like receptor signaling pathway
smeo04623  Cytosolic DNA-sensing pathway
smeo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124376353 (ifnphi3)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    124376353 (ifnphi3)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124376353 (ifnphi3)
   04621 NOD-like receptor signaling pathway
    124376353 (ifnphi3)
   04622 RIG-I-like receptor signaling pathway
    124376353 (ifnphi3)
   04623 Cytosolic DNA-sensing pathway
    124376353 (ifnphi3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124376353 (ifnphi3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:smeo04052]
    124376353 (ifnphi3)
Cytokines and neuropeptides [BR:smeo04052]
 Cytokines
  Interferons
   124376353 (ifnphi3)
SSDB
Motif
Pfam: Interferon DUF2536
Other DBs
NCBI-GeneID: 124376353
NCBI-ProteinID: XP_046691360
LinkDB
Position
22:1781016..1783148
AA seq 188 aa
MAGLHAFTWLCTLIICTMQVSSMPTPCRLQRRLIEGSYNYLDKMGDRLPLHCLEGTVPVP
FPETAFLFNTSEQVIALEKTIYLTLTHISSLFNEEGTPEHWKNLEVFENIIDRQIEENQC
IMNKVLDSQENFLQREKALKEYFDKISTVLKEKDFQVCGWEIVRKEVLITLQFILNKDLD
GVLISTKG
NT seq 567 nt   +upstreamnt  +downstreamnt
atggcaggtcttcatgctttcacctggctgtgcaccttgatcatctgcaccatgcaggtt
agctccatgcctacaccctgcaggcttcagaggagactaatagaagggagctacaattat
ctggacaaaatgggagacagattgcctttgcactgccttgaaggcactgttcctgtcccg
tttcccgagacagctttcctgtttaacacgtctgaacaggtcattgccctggaaaagact
atctacttaactttgacccacatctcctccttgtttaatgaagaaggaactcctgaacac
tggaaaaaccttgaggtctttgagaacattattgaccgccagattgaggagaaccaatgt
atcatgaacaaagttctagactcacaggaaaactttctccagcgtgaaaaggccctcaaa
gagtatttcgacaaaatctcaaccgttttgaaagaaaaggatttccaggtttgtggttgg
gaaatcgtccgaaaggaggtgctcatcactctacagttcattctgaataaagacttggac
ggtgttctcatttccaccaagggctga

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