Silurus meridionalis (southern catfish): 124376353
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Entry
124376353 CDS
T08004
Symbol
ifnphi3
Name
(RefSeq) interferon phi 3
KO
K05414
interferon alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04217
Necroptosis
smeo04620
Toll-like receptor signaling pathway
smeo04621
NOD-like receptor signaling pathway
smeo04622
RIG-I-like receptor signaling pathway
smeo04623
Cytosolic DNA-sensing pathway
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124376353 (ifnphi3)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124376353 (ifnphi3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124376353 (ifnphi3)
04621 NOD-like receptor signaling pathway
124376353 (ifnphi3)
04622 RIG-I-like receptor signaling pathway
124376353 (ifnphi3)
04623 Cytosolic DNA-sensing pathway
124376353 (ifnphi3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124376353 (ifnphi3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124376353 (ifnphi3)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Interferons
124376353 (ifnphi3)
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Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF2536
Motif
Other DBs
NCBI-GeneID:
124376353
NCBI-ProteinID:
XP_046691360
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Position
22:1781016..1783148
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AA seq
188 aa
AA seq
DB search
MAGLHAFTWLCTLIICTMQVSSMPTPCRLQRRLIEGSYNYLDKMGDRLPLHCLEGTVPVP
FPETAFLFNTSEQVIALEKTIYLTLTHISSLFNEEGTPEHWKNLEVFENIIDRQIEENQC
IMNKVLDSQENFLQREKALKEYFDKISTVLKEKDFQVCGWEIVRKEVLITLQFILNKDLD
GVLISTKG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcttcatgctttcacctggctgtgcaccttgatcatctgcaccatgcaggtt
agctccatgcctacaccctgcaggcttcagaggagactaatagaagggagctacaattat
ctggacaaaatgggagacagattgcctttgcactgccttgaaggcactgttcctgtcccg
tttcccgagacagctttcctgtttaacacgtctgaacaggtcattgccctggaaaagact
atctacttaactttgacccacatctcctccttgtttaatgaagaaggaactcctgaacac
tggaaaaaccttgaggtctttgagaacattattgaccgccagattgaggagaaccaatgt
atcatgaacaaagttctagactcacaggaaaactttctccagcgtgaaaaggccctcaaa
gagtatttcgacaaaatctcaaccgttttgaaagaaaaggatttccaggtttgtggttgg
gaaatcgtccgaaaggaggtgctcatcactctacagttcattctgaataaagacttggac
ggtgttctcatttccaccaagggctga
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