Silurus meridionalis (southern catfish): 124376354
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Entry
124376354 CDS
T08004
Name
(RefSeq) interferon alpha-4-like
KO
K05414
interferon alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04217
Necroptosis
smeo04620
Toll-like receptor signaling pathway
smeo04621
NOD-like receptor signaling pathway
smeo04622
RIG-I-like receptor signaling pathway
smeo04623
Cytosolic DNA-sensing pathway
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124376354
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124376354
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124376354
04621 NOD-like receptor signaling pathway
124376354
04622 RIG-I-like receptor signaling pathway
124376354
04623 Cytosolic DNA-sensing pathway
124376354
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124376354
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124376354
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Interferons
124376354
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Exo84_C
Transposase_mut
Motif
Other DBs
NCBI-GeneID:
124376354
NCBI-ProteinID:
XP_046691361
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Position
22:1793208..1794651
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AA seq
180 aa
AA seq
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MELMKVVLLLMILISVCGAASLPSCSWTHFRLRRLNEECIGLLKNMGDRMPLECLQLESN
IFPDDVFNKSQNEDVALVALETLKGVNKIFRNKQTSVTWNQDQLGLFKNIIHRQVKNLQE
CVEKEVQTVMDSSSAILRPYFERLEKRLKEKKFSSCGWEMVRTQLQDGLEKFQTFLESKK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgaaggtcgtgctgctgttaatgatcttgataagtgtgtgtggagcggcc
agtcttccatcctgcagttggacacacttcagacttagaagactgaacgaggagtgtatt
ggactgctcaagaacatgggtgatcggatgcctttggagtgtttacagttagagagcaac
atctttcccgatgacgtgttcaataaatctcagaatgaagacgtggccttggtggctctt
gaaactctaaaaggagtgaacaaaatcttcagaaacaaacaaacctcagtcacatggaac
caagatcaacttggactcttcaagaacatcatacatagacaagtgaaaaacctgcaagaa
tgcgtagagaaagaggtccagacagtgatggacagcagctctgctatactgaggccttat
tttgaaaggctggagaagcgactgaaagagaagaagttcagctcgtgcggctgggagatg
gtgagaactcagctgcaggatggactcgagaagtttcaaacctttctagagagcaagaag
taa
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