Silurus meridionalis (southern catfish): 124376435
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Entry
124376435 CDS
T08004
Symbol
cdk12
Name
(RefSeq) cyclin-dependent kinase 12
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124376435 (cdk12)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
124376435 (cdk12)
2.7.11.23 [RNA-polymerase]-subunit kinase
124376435 (cdk12)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: CMGC group
CDK family
124376435 (cdk12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Pkinase_fungal
Kdo
Kinase-like
Motif
Other DBs
NCBI-GeneID:
124376435
NCBI-ProteinID:
XP_046691477
LinkDB
All DBs
Position
22:complement(916250..943478)
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AA seq
1294 aa
AA seq
DB search
MPGSDRHHVTKRKSETEYKHQPAATGSADSRLHQTKSTGSSSSSSSSSSSLSKHNKRHKP
SKHGSRADSPVEPPVVSIKPLVEYDDISSDSDEFLDLPVAPALKPQDEAYRGKEIRTHKR
KRSRKKSKDPHRVRESGADGDRDVRAKRATEREAKDAKRKSRDKLASAGAVSRPDVDSAS
RRATAESSVALQLPESSSSTSMKSKSKESHETSHRSTHRPSHRNKPEHEHEREHSERNRR
KTSKNRKSSRTGGGGGGGAVGVSVSSPVDPEDGYSSRRRANTPSPYRDSSRRSRQRSESP
YSRRRSSSYDRDGSPYTNRRSCSTSPVSRRSIRSRSRSPLYSSSRRSASHSRSKKHSSLG
GASGSSASRSRPASRSPSSRLPISSSLGAELTRRKKERQAAAAARAAATPPTQPAVTPPT
QPPDQKVEPEPAPPPAPELSSVPNLISSGEIDVAPPPPPLPANSPPPLPLNSPPPLPLNS
PPPLPLNSPPPLPLNSPPPLPASVPPTSSALLPQSKSPAHKSTPIKTSTLPPLPLPPVLL
GDCRDSPKKATPTHRTSRKEREREREKEREKEVRTRLLSDLPLPPLLTGMDSSPPLSPVQ
DALPPVQPTYKKRPKFCSPRFGEKRQTQIDWGKRCVDKFDIIGIIGEGTYGQVYKAREKD
TGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRSVVNMKEIVTDKQDALDFKKDKGA
FYLVFEYMDHDLMGLLESGLVSFSHEHIRSFMRQLMEGLDYCHKKNFLHRDIKCSNILLN
NSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGE
LFTKKPIFQANQELLQLELISRLCGSPCPAAWPDVIKLPYFNTMKPKKQYRRRLREEFSF
LPSPALDLFDRMLTLDPLRRCTAEQALASGFLSDVDPSKMPPPDLPHWQDCHELWSKKRR
RQRQSGLTEDPPVQKAVQQKDSGSTTSRDNNQSAASSSPAAPQPHTLISQVCTSHTHTDL
TGLSAVADQLNQTEMAVLLNLLQGQTERLTLPQMAEQLLSSSSSSLPVLDSAPDADSTHQ
LELLSHTLSSLIQASNNVPAAAAPPPPPPEAPQPEAPPPEAPPSEDPTGLLALLLSQLIK
APPQGLGQGEESNGVQSDGAVTRSGSASLSGTDCKDSTLFSEKPLAPPSVLPHDPATPAP
PSAQSDDLHSDMASTLLQLISQHASESKPTSSDSQHLKETKPSSSYSSPGALIFSQPEHD
ANNANTNAGAQYPRDQDLRFTLGSCPEERLESES
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgcctggctcagaccgacatcatgtcaccaagcggaagtcggaaactgaatacaaacac
caaccggccgccaccggaagcgccgactccaggcttcatcagaccaaatccacaggctcc
tcctcatcctcctcatcttcatcctcatccctgtcgaagcacaacaaacgccacaaaccg
tccaaacacggcagcagggcagattccccagtggagccccctgtcgtctccattaagccc
ttggtggaatacgatgacatcagttccgactcggacgagttcctggacctccctgtggcc
ccggccctgaaaccgcaggacgaggcgtaccgcggcaaagagatccggactcataaacgc
aaacgctcaaggaaaaagtccaaagacccccaccgggtccgggaatcgggtgccgacggg
gaccgggacgtcagggcgaagagggccaccgaacgggaggcgaaagacgcgaagcggaaa
agcagagacaagctcgcgtctgccggggctgtctcaaggccagacgtcgactctgcttcg
agacgagccaccgcggagtcgtccgttgctctgcagctcccagagtcctccagctcgacc
tcgatgaaaagcaaaagcaaagaatcgcatgagacgtctcaccgctcgactcaccggccg
tctcaccggaacaaaccagagcacgaacacgagcgtgagcattcggaacgcaaccgccgc
aagacctccaaaaaccgcaagtcatctcgaaccggtggtggtggtggcggcggtgcggtc
ggcgtctccgtctcctcccctgtggatcctgaggacgggtactcgtcccggcgccgcgcc
aacaccccgagcccgtaccgggacagctcacgccggagcagacagagatccgagagtccg
tactcgcgcaggaggtcctccagctatgaccgggatggcagcccgtacacgaacagacgt
tcctgcagcaccagtcctgtgtctcgacgctcgatcaggtctcgcagtcgctctcctctg
tactcgtcctctcgccgatccgcctcacactcgcgcagcaagaaacattcgtcactaggt
ggagccagtgggagctccgcctccaggagccgcccagccagccgatctccttcctctcgc
ctgcccatctcttcgagcctgggggcggagcttacacgcaggaaaaaagagagacaagcc
gcagcagcagctcgggcggctgcaaccccgcccactcaaccggctgtgaccccgcccact
caacctccagaccagaaggtggagccagagccagccccacccccagcacctgagctttct
tctgttcccaatctcatttcatcaggggaaatagacgtagcaccgccccctcctccactt
cctgcaaactctccgcccccacttcctttaaattctccacccccacttccattaaattct
ccgcccccacttccattaaattctccaccaccacttcctctgaactcccctcctccactt
cctgcttcggtcccacctacatcttcagccctactgcctcagtccaaaagccccgcccac
aaatccacgcctatcaaaacctccacgcttccacccctccccctaccaccggtactactg
ggagactgcagggacagcccgaagaaggccacgcccactcaccgtacctccaggaaagaa
cgagagagagaaagggagaaagagagggagaaagaggttaggacacgcctcctcagtgat
ttgcccctcccacctttattaactggaatggattcatctccgcccctttcgccagtgcaa
gacgccctgcctcctgtacagcccacttataagaagagaccaaagttctgctctcctcgt
tttggtgagaagagacagacacagatcgactggggaaaacgctgtgtggacaagttcgac
atcataggcatcatcggagaaggaacgtacggccaggtgtacaaagccagagagaaggac
acaggtgagctggtggccctaaagaaggtgcgtttggataatgagaaggagggcttcccc
atcacagccattcgcgagattaaaatcctcagacagttaaaccaccgcagtgtcgtcaac
atgaaggagatcgtcaccgacaagcaggatgctcttgacttcaaaaaggacaaaggagcg
ttctacctggtgtttgagtacatggaccacgacttgatgggactgttggagtcgggtctc
gtctccttctcacacgaacacatccgcagcttcatgaggcaactgatggagggacttgac
tactgtcacaagaagaacttcctacacagggacatcaagtgttccaacatcctgctcaac
aacagtgggcagataaagctggctgattttgggttggctcgtctctataactcagaggaa
agtcggccgtacaccaataaggtgataacactgtggtaccgcccacctgagctgctgctg
ggagaggagagatacacacctgccattgatgtctggagctgcgggtgcattctgggagag
cttttcaccaagaagcccattttccaggcgaaccaggagcttctgcagctcgagctcatc
agtcgtctgtgtggcagtccgtgtcctgcagcgtggcctgacgtcattaagctgccttac
ttcaacaccatgaagcccaagaagcagtacagacgccgcttacgcgaggagttctccttt
ttgccctctccagctctggacctgtttgaccgtatgttgaccctcgaccccttgcgcagg
tgtacagcagagcaggccctggccagcggcttcctctctgacgtcgaccccagcaagatg
ccacctccagatttaccccactggcaggactgtcatgagttgtggagtaagaagaggcgg
agacagaggcagagtgggctgaccgaggacccgcctgttcagaaagcagtgcagcagaag
gactcggggagcacaaccagccgagacaacaaccaatcagcagccagctcctctccagca
gctccccagccacacacactgatctcacaggtgtgtacatctcacacacacactgatctc
acaggtctgagtgcagtagctgatcagttgaatcagacggagatggcggtcctgttaaac
ctgctgcagggtcagactgagcgtctcactcttcctcagatggctgagcagctcctctct
tcctcctcttcttcacttcctgtccttgactccgccccagatgctgactccacccatcaa
ctggagctgctcagtcacaccctatcgtctctaattcaggcgtccaataacgtaccggct
gctgctgctcctcctcctcctcctcctgaagctcctcaacctgaggctcctcccccagaa
gccccgccttcagaagatcctacaggcctcctcgcgctgctcctgagccagctgattaaa
gctccgccccaggggctgggccaaggcgaggagagcaacggggtccagtcagacggggcg
gtgaccagaagcggctccgcctctctttccggcactgactgcaaggattcaaccctcttc
agtgagaagcctctcgccccaccctcagtgctgccccatgaccccgcgaccccggcccct
ccatctgcacagtcagatgatcttcatagcgacatggcgtctactctcctgcagctaatt
tctcagcatgcctcagaaagcaagcccacttcttcagactctcagcatctgaaagagact
aagccttcgtcctcgtattcctctccaggagcgctaatcttcagccagcctgaacacgat
gctaacaatgctaacactaacgcgggagcgcagtacccacgggaccaggacctccgtttc
accctggggtcctgccccgaggagagactagagagtgagtcctga
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