Silurus meridionalis (southern catfish): 124376460
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Entry
124376460 CDS
T08004
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124376460 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124376460 (vps45)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124376460 (vps45)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
124376460
NCBI-ProteinID:
XP_046691517
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All DBs
Position
22:11449181..11455971
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AA seq
571 aa
AA seq
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MNVTLAVKQYVTKMIESSGPGMKVLLMDKETTSIVSMVYTQSEILQKEVYLFERIDSQNR
DSMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIFFSNVISKSEVKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLQGVSRGRSWDSSVLPRVTQGLTSVLLALKKCPMIRYQLS
SDMAKRLAESVKQIISKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGINKDLREVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
DQQKLESIADMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSEVEQELACQ
NDHSNAQQNVRRMLQNPRVSELDAVRLVMLYALRYERHSSSILPNLMEELHRKGVSEKYR
KMVQAVIDYGGKRVRGSDLITPTDAVAITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFIIGGATYEEALTVYNLNRTMPGVRIVLGGTAIHNT
KSFLEEVTLAAGLSHGEARGSHGAGRPPTRH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgactttagctgttaaacagtatgtcactaagatgatagaaagcagcggacca
ggaatgaaggttctgctcatggataaagaaacgaccagcattgtgagtatggtctacaca
caatctgagatcctgcagaaggaggtctacctgtttgagcggatagactcccagaaccgt
gacagcatgaaacatctgaaggccatctgcttcctcagaccaaccaaggaaaatgtggag
aatcttattcaggagctgcggcgtcccaaatacagcgtatactttatctttttcagcaat
gtcatcagtaagagtgaagtgaaggccctggcagaagctgatgaacaggaggttgtggca
gaggtgcaggagttttatggagacttcatcgctgtgaatcctcatcttttctccctcaat
ctgcaaggagtgtccaggggtcgcagttgggattccagtgtccttccacgtgtcactcaa
ggtttgacctctgtgctgttggctttaaagaagtgtcccatgattcgttaccagctttcc
tctgacatggcaaagagactggctgaaagtgtaaagcaaataatcagcaaggagtatgaa
ctgtttgacttcaggaaaaccgaagtgcctcctcttctgctgatcctggacagaagtgat
gatgcgatcacacccctccttaaccagtggacatatcaggcaatggttcatgagctgctt
ggtctaaacaacaaccgaatagatctgtcccgagtgcctggcataaataaagacctgaga
gaggtggtgctgtctgccgagaatgatgaattctatgctaataacttgtacctgaacttt
ggtgaaattggaacaaacattaaaaacctgatggaggactttcagaagaaaaagccaaag
gaccaacagaaactagagtccattgctgatatgaaggcttttgtggataattacccacag
tttaagaagatgtcaggcacggtttccaaacatgtgacggtggtgggcgagttgtctcgt
ctagtcagtgagaggcagttaatggaggtgtctgaggtggagcaggagcttgcatgccag
aatgatcactctaacgcccagcagaatgtgcgacggatgctgcagaacccacgtgtgtca
gagcttgatgcagtgcgtctggtgatgttatatgctctgcgctatgagcgacacagcagc
agcatcctgcccaatcttatggaagagcttcacaggaaaggggtgtctgaaaagtaccgc
aagatggtacaagccgtgattgactacggaggcaaacgggtcagaggaagtgatctcatt
actcctacagatgctgtggccatcaccaaacagtttttcaaaggactcaaaggtgttgag
aatgtctatacccagcaccagcctctgcttcatgacacgctggatcaactaattaaaggc
cgtttgaaggacagtcagtttccctacctcgggccaagttctctgcgggacaggccgcag
gacatcattgtctttatcattggaggagccacgtacgaggaagcactgaccgtgtacaac
ttgaaccgcaccatgccaggggttcgcatcgtgcttggaggaacagccatccacaacacc
aaaagcttcctggaagaggtcactttagcagctggcttgagtcatggggaagccaggggt
tcacatggagctgggcgtccaccaaccaggcactga
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