Silurus meridionalis (southern catfish): 124376479
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Entry
124376479 CDS
T08004
Symbol
elp2
Name
(RefSeq) LOW QUALITY PROTEIN: elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124376479 (elp2)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
124376479 (elp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Rax2
Motif
Other DBs
NCBI-GeneID:
124376479
NCBI-ProteinID:
XP_046691549
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Position
22:complement(16389822..16430556)
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AA seq
827 aa
AA seq
DB search
MASSLMTTCHVACCANRTPHVVSWGRRDLIAFGTCNSVALYDPQEVKVVQLLNKHSGRVN
TVRWIYREDCGPETLLISGGSDSNIIVWEEQHGQFAASAVCSGHSGPVCSVDAVPLSSSD
SLLVSASSDSTVKLWTYGGEKAECLQTLSFGSGFMMDVSLALLPGSRVPILACGGDDSKV
YLYVQINGQFQKVLTLQGHEDWVXGVEWAAKDEELLLASCSQDCLIRVWRLVLKCDTHSE
EAAEGIIRMKEDVFEVKGKKYAVSLETVLAGHENWVYGIHWQPSFMDGKCITGGTVEQPL
SLLSASMDKTMILWGPEEESGVWVEQVRVGEVGGNTLGFFGCQMSPDGSKILAHAFHGAL
HLWQKDPGQQIKWSPAVVVSAHFNSVQDLSWDPEGEFLLSVGSDQTTRVFAPWRRKDCSQ
VTWHEISRPQIHGYDMQCLAMVGRFQFVSGADEKVLRVFKAPRNFVENLANIVGTSMEKL
LASHDVVGLPEGASTPALGLSNKAVFQGDLTIKSTQEEGQDINRVSDQYKESYFHPLSLT
EPPPEDHLLQNTLWPEVQKLYGHGFETFCLASDAAQTVVASACKASKAEHAAILLWSTST
WKQLQALPCHSLTVTQMAFSPDSRLLLAVSRDRTWSLWRCEDAGPKASEPRFSLYTHTSK
DSAVHTRIIWSCDWSPDNKYFVTASRDKKVIMWGHRGSDEPVGMNNSAVTPCSSVLDVGD
SATAVAICPSLLSDQSYLVAVGLEGGQLLLYKWRPADDLTSGSDWSRCAESDVSQSHTLV
VKRLRWRPRVCQQEETEGWNHQSTSVQLASAGADHTVKIFNINTLAL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctccttgatgacaacatgccatgtagcgtgttgcgcgaaccgaaccccgcat
gtcgtctcctggggccgcagagatctgatcgcctttggcacttgtaattcagttgctctg
tacgatcctcaggaggtgaaagttgtgcagctcctgaataagcacagtggaagagtcaac
accgtgaggtggatttacagagaggactgtggtccagaaacactgctgatatctggagga
tccgacagtaatattattgtatgggaggagcaacatggtcagtttgctgcctccgcagtg
tgttcaggccactcaggacctgtttgttcagtggatgctgtaccgctgtcttcctccgac
tcgctgctcgtctctgcttcatcagactccacggttaaactgtggacgtacggcggtgaa
aaagccgaatgcctccagacgttatctttcgggagcggcttcatgatggatgtctcctta
gcgctgttgccaggcagccgagtgcccatcctagcgtgcggtggagacgacagcaaagtc
tatctgtatgtgcagatcaatggacagtttcagaaagttctcacacttcaaggccatgag
gattgggtcncgggtgttgaatgggcagcaaaagatgaggagttgctgttggccagttgc
tctcaggactgtctgatcagagtgtggcggctggtgctaaaatgcgacacacactccgag
gaggccgcagaaggaattattaggatgaaggaagatgtgtttgaggtgaaggggaaaaag
tacgcggtgagtcttgagactgtgttagctggccatgagaactgggtgtatgggatccac
tggcaaccttcatttatggacggtaaatgcattacaggcggcacagtggaacagcctctg
agtctgctttctgcttctatggacaagactatgatcctctgggggccggaggaggagtca
ggggtgtgggtggagcaggtgcgtgtcggagaggtgggaggaaacacgcttggcttcttc
ggctgtcaaatgagtcccgacggctccaagattcttgctcatgccttccacggagcgctg
cacctctggcaaaaagacccgggccagcagattaaatggagtcctgcggtggtggtgtct
gctcactttaattcagtgcaggacctgagctgggatccagagggagaatttctcctcagc
gtgggctccgaccagacaaccagagtcttcgcaccatggaggaggaaagactgttcccag
gttacctggcacgagatctccaggcctcagatccacggctatgacatgcagtgcctggct
atggtgggcagattccagtttgtctctggagctgacgaaaaagtgctgcgtgtgtttaag
gctccgcgaaactttgtggaaaaccttgccaacatcgtcggcacttccatggagaaactt
ttggcttcacatgatgttgtaggtctaccagaaggagccagcacaccagcactcggtctc
tctaataaggctgtgtttcaaggcgatttgacgattaagagcacccaagaggaggggcag
gatatcaacagggtgtctgaccagtacaaggagtcttactttcatcctctcagtttaaca
gaaccccctcctgaggaccacctcctgcagaacacgttgtggcctgaggtccagaagctg
tacggtcacggatttgagacgttctgtctggcttcggacgctgcgcaaactgtggtcgcc
tcagcatgtaaggcttctaaagcggagcatgctgctatccttctatggagcacctccacc
tggaaacagctacaagctcttccatgccacagtctgactgttactcagatggctttctcc
ccagactcgcgcctgcttctcgccgtgtcccgagaccgaacctggtcattatggagatgt
gaggacgctggacccaaagcttcagagcccagattctcgctttacacacacaccagtaag
gactcggcagtgcacacgcgcatcatttggtcttgtgactggagcccggacaataagtac
ttcgtgacagctagtcgggataagaaggtgataatgtggggtcatcgtggctctgatgaa
ccagttggcatgaacaacagtgcagttactccctgttcttctgtcctggatgtgggcgat
tcagccaccgctgtagctatctgcccttcccttctctcagaccaaagctacctggtagca
gtgggtctggagggcgggcagctgcttctgtataaatggaggccagcggacgatctgact
tcaggatcagactggagcaggtgtgccgaaagcgatgtctcccaaagtcacacgctggtg
gtgaagagactgcgctggaggccgcgagtctgtcagcaggaagagaccgaaggctggaac
caccaaagcacctctgtacagttagccagtgccggagctgaccacaccgtcaaaatcttc
aacatcaacacgctggctctgtag
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